Polistes canadensis: 106788505
Help
Entry
106788505 CDS
T05611
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
pcf
Polistes canadensis
Pathway
pcf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106788505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcf03019
]
106788505
Messenger RNA biogenesis [BR:
pcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106788505
mRNA degradation factors
5'-3' decay
Decapping complex
106788505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Cep57_CLD_2
WD40_Prp19
ELFV_dehydrog_N
WD40_CDC20-Fz
EcsC
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
PhoU
Motif
Other DBs
NCBI-GeneID:
106788505
NCBI-ProteinID:
XP_014607305
LinkDB
All DBs
Position
Unknown
AA seq
1088 aa
AA seq
DB search
MIKTGEENLRHLKYPQTVEFSGQEDQHSVELYSQNVTIIPSSGGHDHGSSKVKLKNIVDF
TWEHNFYTGQLLAVHMSGKYLAYGIKVGTGGGVVRVVYKELEQRALLRGMRGAIQDLAFA
HVSNAILACVDYSGNLFIHTIESTPSELLCNLVLQVDAEESSPTSHRVIWCPYIPEDDPS
DGDAVSKLLVLTRGSKAELWSVANVAARFRSIEATDPAAKESGGMIEINQHSGMIIEATF
SPDGTALATASLDGEVKFFQVYMPCNSHGTTQPHCLHKWQPHGGRPISCLFFLDDHQTCQ
PDVQFWRFAITGCDNNSELKVWSCELWTCLQTITFAPTPSTGKVPVLKAGLDLSAGYLLL
SDIYNKVLYILSICKVSGEALACVNTISEFLLPYPILSFGIVDAGQRKIRPMGESLEDLT
QCEEETEEQLVIRMYLVQPKSLQECHIAFKPASRVSGNCLMDMLIHDSLIIHNSEDLLDI
GIVNHNGISGENSEEDRMLSATIENTNNHNTGLNLMTPDAFSSPEKKENNDIESSPPSPE
LEDVISVSPSLAQAVQALNASDPPLATNELEEHAPASGGSSPSREVREILSLSKQEEEEA
DSENKEEAAPNTGEDWPNIPMVLLKDVNVHAMKPDSEEYQNEEDNNTAQRNTTKDETNST
THISCEQETQWQNTANNINVTEITNKIDSILETIQEQYQEIRELKNEVTRLRQESPISTH
VESVLARASQQQTATLEQLYGQMNRQRELLNTLETTIKDKIENILPRIVEETVEPLKRQL
HLDVTRMDDLLKDNLTKLINSTHIKDTLALAAANAAKPALDVAFKDTFTNILLPGMEKAC
QNMFKQVQDAFVKGTREYLQSVDSIMDKQYKQRNEQQIEALSLSVREEIRSEFSRGISSM
QEDTVRIVRESIRENLNQQLNEISGVRSRATTPATISVPAVADAQARVVSLLQRGQLNAA
FQQALSASDLGLVVLACERTEPSRVFSSPLGPQGQGTRCILQQPVLLSLVQQLSADLGHR
TELKHRWLEEAILNLDPNDPVTREHMGTVLMTLQSQLAAFVTANPNHRSTRRMKMLAMAA
RALLAQHP
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaactggagaagaaaatctacgacacttgaaatatccgcagacagtggaattc
agcggacaagaggatcaacattcggtagaattgtatagtcaaaatgtaacaatcattcca
tcgtcaggtggccatgatcatggaagttccaaagttaaattaaaaaatatcgttgacttt
acttgggaacataatttttatactggccaattattggctgttcatatgtctggaaaatac
ttagcttatggtatcaaagttggaacaggaggcggagtagtacgggttgtatataaagaa
ttagaacaaagagcgttattaagagggatgcgtggagctatacaagatctagcttttgct
catgtatcaaatgctattttagcttgtgtcgactactcaggaaacctctttatacatact
attgaatcaacaccatccgaactattatgtaatttagtattacaagtggatgctgaagaa
tcttctcctactagtcatcgtgttatttggtgtccttatattcccgaagatgatccatcg
gatggtgatgcagtatctaaactattggtactaacgaggggttctaaggcagagctatgg
tcggttgccaatgttgcagctagatttagatctatagaggcaactgatccagctgcaaaa
gaaagtggcggcatgatagaaattaatcaacactcagggatgatcatcgaggcgacgttt
agtcccgatggtactgccttagctacagccagtcttgatggagaagtgaagttcttccag
gtatatatgccatgtaattctcatggcacgactcaaccgcattgtttacataaatggcaa
ccacacggtggacgtcccatttcttgtctatttttcctcgacgaccatcaaacttgtcaa
cctgacgtacaattctggagattcgctattactggctgtgacaataattcagaattgaaa
gtctggtcgtgcgaattatggacgtgtttgcaaacaattacatttgcgccaactccttcg
actggaaaagttcctgtattgaaagcaggcttagaccttagcgccggttatcttttgttg
tctgacatatataataaagttctgtacatattgagtatttgtaaagtcagtggagaggca
ttagcgtgcgtaaatacgatatcagaatttcttctgccatatccgattttgagttttgga
atagttgatgctgggcaaagaaaaatacgtccaatgggagaatccttagaagatcttacc
cagtgcgaggaagaaacagaggaacaacttgttattagaatgtatttggttcaacctaaa
tcgctgcaagaatgtcatatagcatttaagcccgcctcgcgagtgagtggcaactgcctc
atggatatgctcatccatgattccttgatcatccataattcggaagatttgctagatatt
gggattgttaatcacaatggaatttcaggagaaaatagcgaagaagatcgtatgttatcg
gctaccatcgaaaacacgaataatcataacacaggattaaatttaatgacaccagatgca
tttagctcgccggagaagaaagaaaacaacgacatagaatcaagtcctcctagtcctgaa
cttgaagacgtgatatccgttagtccctccttggcgcaggcagtacaagcgttgaatgct
tcggatccaccccttgcgacgaacgaattagaagaacatgcgccagctagcggtggtagt
agtcctagtagagaagtcagagaaatcttatcgctcagtaaacaagaagaggaagaagcc
gattctgaaaataaagaggaagcagcaccgaatacaggagaagattggcctaatattcca
atggttttattgaaagatgtcaatgtacatgccatgaaaccagactctgaagaatatcaa
aatgaagaagataataatactgcacaaaggaacacgactaaggacgagactaactcgacg
actcacatttcgtgcgaacaagaaactcaatggcaaaacactgcaaataatattaacgtc
actgaaataactaataaaatagattctattttggaaactattcaagaacagtatcaagaa
attagagaattaaaaaatgaagtaacgagattaagacaggaatcaccgatatcgacgcat
gttgaatcggttttagcaagagcatcgcaacaacaaacggcaacgttagaacaattatat
ggacaaatgaatcgtcaacgtgaattattaaacacacttgaaacaacgattaaagacaaa
atagaaaatattttaccgcgaatagttgaagaaacggttgaaccattaaaacgtcaacta
catttggacgtaacgcgcatggacgatttgttaaaagataatttaactaaattgattaat
agtacacatattaaggatacattggcattagctgcagccaatgcagctaaaccagctctt
gatgtagcttttaaagacacttttacaaacatccttttacctggcatggaaaaagcttgc
caaaatatgttcaagcaagtacaagatgcattcgtcaaaggtacccgcgaatatcttcaa
agcgtcgattctatcatggataagcaatataaacaacgaaatgaacaacaaatcgaagca
ctgtcattgtcagtacgcgaagaaattcgaagtgaattttctcgaggaatatcttccatg
caagaggatactgtacgtatagttcgagaatcgatcagggaaaatttaaatcaacaattg
aacgaaatatctggcgtacgttcacgggctacgactcctgcaacaatatctgtacctgct
gttgccgacgcacaagctcgagttgtgtctttactgcaaagaggtcaattaaatgctgct
ttccaacaagctttaagtgctagtgatttgggattggtcgttttggcttgtgaaaggacg
gagccatcaagggtattttcttctcctcttggacctcagggtcaaggtactagatgtatt
ttacagcagccggtattattatcattagtccaacaactttctgccgatttaggacatcgt
acagaacttaagcacaggtggttagaagaagctatattaaatttagatccaaatgatcca
gtaactcgagagcacatgggtactgtgttaatgactttgcaaagtcaattagctgctttt
gtaacggcaaatccaaatcaccggtcaactcgacgaatgaaaatgttagccatggcagca
cgcgctttattagctcaacatccttga
DBGET
integrated database retrieval system
