Polistes canadensis: 106788612 Help Entry 106788612         CDS       T05611                                  Name (RefSeq) collagen alpha-1(XI) chain-like   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism pcf  Polistes canadensis Pathway pcf04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:pcf00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     106788612  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:pcf00536]     106788612 Glycosaminoglycan binding proteins [BR:pcf00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    106788612 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_1 Glyco_hydro_59_C Motif Other DBs NCBI-GeneID:  106788612 NCBI-ProteinID:  XP_014607514 LinkDB All DBs Position Unknown AA seq 1739 aa AA seqDB search MHKLDRIKQLWRTLRFVCAIIHPYVVLVFLPFALPGITMADFNLRDIENGVVDLMESTGM YQEPSGVTVTNNRCNRNDTVAYNIAEYSLLTINTNAVFPNGLINNFSIIVVAKTKLDYPM ATLFSIYDDGGQEQMILSIGKDVTFFYDTSDNVNEDMAESISFGTDISDGKWHRLSISVK GNAITLLLDCKIEITKELKRNLSDSINVNGIVIIGQQLMEEKIYLGGLELLKIAPTPDTA YELCTIFAPDCKEKDEPKSLNISVYDRHTNYDDFDDMEDNEKDNYNEDDLKAFPLRYVPT NYTFILRPTMETNEQSLTQTYDTNEVSTTESYTRETFTTEENIYPTIVSYNVPSSSNTNE DSYYKYYNLRGSPGPRGYPGPPGMAGPPGKKGEPGKDGLSGVQGAPGPPGHVFMIPSIGI SQQGNEKGPDSQTEVLKQVLSQYMVAMRGSEGPMGLTGIPGSDGPPGPQGQKGEPGDVGE PGPRGERGIPGNTGREGRRGRPGRDGERGPTGPPGIKGEQGPPGLPGLPGDKGERGPPGA VGEPGLPGHEGMQGDDGPPGLPGLPGELGPRGFIGPRGFPGMPGNPGIPGSEGSPGAKGN TGLSGPPGSLGPPGPVGPVGPPGPQGPLGPTGLAGPQGKPGIPGLPGADGHPGNPGNPGV PGLKGEQGIMGPQGSIGFPGIRGPKGDDGKRGLPGDRGEKGDRGIEGEKGDPGMKGERGQ PGPQGAPGVEGTEGPKGFEGVRGEQGPTGLPGEKGKIGVPGFAGYPGNPGEKGDKGQIGR EGLSGEKGERGNNGLQGDRGELGPRGFRGVRGRRGSEGLPGPKGDTGQPGPPGLPGEPGS PGIEGPRGFVGSPGQLGLDGKDGIPGLPGERGPIGESGPPGPVGSPGVIGPQGSPGEPGQ PGEPGIPGSPGVPGEIGTSGEQGKEGPPGPQGLPGKEGPPGPTGLPGFPGERGLAGLPGT PGLKGEMGPIGFPGPSGDKGAQGESGKDGAIGPEGRQGPKGPLGPPGLKGERGEAGLPGP IGRDGLPGQRGLPGPPGPVGVPGEDGDKGDIGPPGEKGFKGSQGSTGPVGPPGLQGPRGE PGLVGVTGEKGPPGEIGRQGMKGEDGPIGVPGPAGPVGPQGLPGPPGSKGEIGDTGQIGL AGPAGSPGEPGDKGPRGADGLQGLQGLEGRQGEKGDSGLPGLPGVAGADGNTGEQGLPGQ KGEEGKAGPPGPPGNRGPVGPEGPKGNVGSPGFPGPPGEPGLLGPKGEPGKDGDDGGPGE PGPPGEIGPTGKEGLTGTQGRPGPEGPAGIQGNTGLPGDKGEVGPPGIPGSQGRPGAEGQ PGPPGLPGVRGLAGSAGEIGQPGIPGAVGLPGKVGPEGPRGPKGDRGRRGIKGHRGDIGP IGMKGDQGEKGEKGIRGSTGPEGPKGNTGPIGLIGLKGNDGPPGLPGLEGPPGPKGHTGN DGSKGDIGPPGPPGPPGPPAEQPMIPPELLFTQSHLYKRKREILEDTKDDNEKKENDLNK EEIEKDDGNELGSKFLDVYSSIYSMRQELDRIRKPTGTRENPVRTCKDLFYGHPHFNDGW YWIDPNLGMPDDAVYVYCNMTNMGETCVFPDTHSSQMPNIPWRKDDDKGNWYSNLRGGFR ITYETIGDIQLNFLRLLSQEGYQNFTYTCMNSIGWYNAPNNSYDSSIRLLGINDVEFSYN NNKPIVLVDGCKSRKSKSETVFNVKADKLDKLPIIDFHPFDYGLPHQAFGFNVGPLCLK NT seq 5220 nt NT seq  +upstreamnt  +downstreamnt atgcataaattagatcgcatcaaacaattatggagaaccctacgatttgtttgtgctatc atccacccttacgtcgtccttgtttttcttccattcgcattacctggaattacgatggct gattttaatctacgtgatatagaaaatggtgtcgtagatcttatggaaagtactgggatg tatcaagaacccagtggtgtaactgttacaaataatcgatgtaatcgaaatgatactgtt gcatataatatcgcagaatattctttattaactatcaacaccaatgctgtctttcctaac ggattgatcaataatttttctattatcgttgttgccaaaaccaaacttgattatcccatg gcaacattgttttcaatttacgacgatggtggtcaggaacaaatgattttatcaatcggc aaagacgtaacatttttttacgatacttctgacaacgttaacgaagacatggcagaatca atatctttcggtacagatatttccgatggtaaatggcatcgtttgagcataagcgttaag ggaaatgcaataacacttttgttagattgcaaaatagaaataacgaaagaattgaaaaga aatctatcggatagcattaacgtaaatggtatcgtcataattggtcaacaacttatggaa gagaaaatatatttgggaggattggaacttttgaagattgcaccaacaccggataccgcg tacgaactttgtacgatatttgcaccagattgcaaagaaaaagatgaacctaaatctttg aatatatctgtctacgataggcataccaattacgatgattttgatgatatggaagataac gagaaagataattacaacgaagatgatttaaaagcattcccattacgatacgttcctacg aattacacgtttattttgagaccaactatggaaaccaacgaacaatctcttacacaaacg tacgatacaaacgaggtatctacgacagagagttacacgagggaaacttttacaacggaa gaaaatatttatccgacaatcgtatcttacaatgtaccatcaagttcgaatacaaacgag gattcttattacaaatattacaatcttcgtggatcaccaggacctaggggttacccgggt ccaccaggaatggctggaccacctggtaaaaaaggtgaacctgggaaagatggattgtca ggtgtacagggtgcacctggtccacctggtcacgtatttatgataccatcgataggaata agtcagcaaggaaatgaaaaaggtcctgattctcaaacagaagtattgaaacaagtttta tcgcaatacatggtagcaatgagaggtagcgagggtccaatgggattgactggtattcct ggttctgatgggcctccgggacctcaaggacagaagggagaaccaggtgacgtaggtgag cctggacctagaggagagagaggaatacctgggaatactggtagggaaggtagaagagga agacctggaagagatggagaacgtggtcctactggaccacctggtataaagggtgaacaa ggtccacctggattaccaggtttgccaggagataaaggtgagagaggaccaccaggagct gttggtgaaccaggattacctggtcatgaaggaatgcaaggtgacgatggaccacctggt ctgccaggattacctggcgaattgggaccgagaggttttatcgggccacgtggtttcccg ggaatgccaggtaatcctggcatacccgggagcgaaggttctccaggtgcgaaaggaaat actggattatcgggtcctcctggatcacttggtccacctggaccagtgggacctgttggt ccacctggtcctcaggggcctttgggaccaactggattagctggaccacaaggaaaacct ggtataccaggtcttcctggagcagatggtcatccaggaaatccaggtaatcctggagtt cctggtttgaaaggtgaacaaggcataatgggtccacaaggatctataggatttcctggc atacgtggtccgaaaggagacgatggtaaacggggattaccaggtgatcgaggtgaaaaa ggtgatagagggattgaaggggaaaaaggagatccaggtatgaaaggagaaagaggacaa ccagggccacaaggagctcccggagtcgaaggtacggaaggaccaaaaggatttgaagga gttcgtggtgaacagggtccgactggattacctggagaaaaaggtaaaataggtgtacct ggtttcgctggatatccgggaaatcctggtgagaagggtgataaaggtcagattggaaga gaaggcttgagcggggaaaagggggaaaggggaaataatggtttacaaggtgatcgtggc gagttaggtcccagaggtttcagaggtgttcgtggtagaagaggttccgaaggattacca ggtccaaaaggtgatactggtcaaccaggacctccaggattaccgggagaacctggatca ccaggaatagaaggtccacgtggatttgtaggatcaccgggacaactcggacttgatgga aaggatggtattcccgggcttccaggagaacgtgggccaattggtgaatctggccctcca ggaccagttggatcgcctggtgtgattggtccacaaggttcacctggagaacctggtcag ccaggtgagcctggtattcctggtagtcctggtgtaccaggagaaattggtacatcaggt gagcaaggtaaagaaggtccacctggtcctcaaggattacctggaaaagaagggccacct ggtcctacaggattgcccggatttcctggtgaaagaggattggctggattgccgggtaca cctgggttgaaaggagaaatgggacctattggtttcccgggaccatcaggagacaaaggt gctcaaggagaatctggaaaagatggagctataggtccggaaggtagacaaggcccgaaa ggaccgcttggtcctcctggcttgaaaggcgaaaggggtgaagctggtttaccagggccg attggtagagatggtttaccaggacaacgaggattaccaggtcctcctggtccagtcggt gttccaggagaagatggtgataaaggagatattgggccacccggtgaaaaaggttttaaa ggttctcaaggttcaactgggccagtagggccaccgggacttcaaggaccacggggagag ccaggtttagtaggagtaacaggtgaaaaaggaccacctggtgaaataggtagacaagga atgaaaggtgaagatggtccaattggtgtacctggtcctgcgggacctgtaggaccacaa ggtcttcctggcccaccaggatcaaaaggagagattggagatacgggtcaaataggactt gctggtccagcaggtagtccaggagagccaggtgacaaagggccgagaggtgcagacggt ttacaaggtttgcaaggtctcgaaggtcgtcaaggagagaaaggagatagcggtttacct ggacttccaggagtagctggtgctgatggaaatacgggagaacaaggccttccgggacaa aaaggagaagaaggtaaagcaggtccacctggtcctcctggaaatcgtggcccggttggt ccagagggaccgaaaggaaacgttggttctcctggttttcctgggcctccaggtgagcca gggttattaggtcctaaaggagaacccggtaaagacggggacgatggtggaccgggagaa cctggacctccaggcgaaattgggccaactggaaaagaaggtttaaccggtacacaagga agaccgggtccagaagggccagcaggaatacaaggtaatacaggtttgccaggagataaa ggtgaagttggaccaccgggtataccgggatctcaaggtcgaccaggtgcagaaggccag ccaggtcctccaggtttacccggtgtaagaggattggcaggttcagcgggagaaattgga caaccaggaattccaggagctgttgggttacctgggaaagttggtcctgaaggaccaaga ggtcctaaaggtgatagaggtcggagaggtattaaaggacatcgtggtgatattggtccg attggaatgaaaggtgatcagggagaaaagggtgaaaaaggaatacgtggtagtaccgga ccagaaggtcctaaaggaaatacagggccaatcggtttaattggtttgaaaggcaacgat ggaccaccgggtttacctggtttggaagggccaccaggacccaaaggtcacactggtaac gatggatcaaaaggtgatataggaccaccaggtccacctggtccacctggtcctccagcg gaacaaccaatgattccacctgaattattattcactcagtcgcacttgtataaaaggaaa cgtgaaattttggaagatacaaaagatgataacgaaaagaaggagaatgatttaaacaaa gaggaaatagaaaaggacgatggcaacgaattaggatcgaaatttttagacgtttatagt tctatttacagtatgcgacaagaattggatcgaataagaaaaccaactggtactagagaa aatcctgttagaacttgtaaagatctattttacggtcatccacatttcaatgatggttgg tactggattgatcctaatttaggtatgcctgacgatgccgtttatgtttattgcaatatg acaaatatgggggaaacttgtgtattcccggatactcacagtagtcaaatgccaaatata ccatggagaaaggatgatgacaaaggcaattggtattccaatttgcgtggtggatttcga atcacttacgagaccattggtgatattcaattaaattttttacgtttgctcagtcaggag ggttatcaaaattttacatacacctgtatgaacagtataggttggtataatgcacctaac aatagttatgattcgtcgatacgtttgttaggtataaacgacgttgaattttcttataat aataacaaaccaattgttctcgttgatggttgtaaatcccgtaagagtaaaagtgaaacg gtatttaatgttaaagcggataaactcgataaattaccgattatagattttcatcctttc gattatggtttacctcatcaggcttttggttttaacgttggtccactttgtttgaaataa

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