Polistes canadensis: 106788737
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Entry
106788737 CDS
T05611
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
pcf
Polistes canadensis
Pathway
pcf03030
DNA replication
pcf03410
Base excision repair
pcf03420
Nucleotide excision repair
pcf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106788737
03410 Base excision repair
106788737
03420 Nucleotide excision repair
106788737
03430 Mismatch repair
106788737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcf03032
]
106788737
03400 DNA repair and recombination proteins [BR:
pcf03400
]
106788737
DNA replication proteins [BR:
pcf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
106788737
DNA repair and recombination proteins [BR:
pcf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
106788737
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
AAA_22
AAA_14
RuvB_N
RNA_helicase
BRCT_2
AAA_17
AAA_30
DUF1824
AAA_5
AAA_33
AAA_7
AAA_assoc_2
PTCB-BRCT
AAA_16
Motif
Other DBs
NCBI-GeneID:
106788737
NCBI-ProteinID:
XP_014607760
LinkDB
All DBs
Position
Unknown
AA seq
1039 aa
AA seq
DB search
MCGIPYFLSIRSLKMPRDIRSYFTSTTVKKSKDQSTDKSADKPTIKTKKRAIISSDEEET
KSSSVVKRTKYTKTFNKHHLLSDSDDEIQITSTVNSKKVESINNTKQESYVKDELKSTIS
PAEMFSKGSVRRETIQRKIKKKNEKEDDKLNLTKLNTKKLEKEYLQNVKEDDNEKNRTNN
TIDDRAEKKTNRTSNEKKKDSVSVDDEISYRKIDTKQEDKSSGSKELSLTNEENNVDTKM
KNFPKKASKRPKAISTIEIESKKAKNENALTNSSTLDEYEERIQMKKQSSMLYQKYLNRG
GARNPGSKEIPQGAEYCLAGLSFVITGVLDSLEDEEAKELIIKYGGRILHQVSRNTDYLI
VGEEYGPAKMAKANELKIKKISEDDLLELIRERPKGKAEDIKKSRSKSKENSISKIEHHE
IPKLQKSVKETVEPVKETVEPVKETVESVKETVEPVKKTVEPLKSLETKLDSKVIANDIV
ITKGCEALVDKYRPKSTKQILGQQGDKSCVKKLHYWLSNWHKNRNKKYVKPSPWAKNDDG
AYFRATLLSGPPGIGKTTSAQVVCNELGFDLLEFNASDTRSKKLLKERVSEILSNTTIKN
FFTGENNSKHVLLMDEVDGMAGNEDRGGLQELVSLIKSTDVPIICICNDRTNPKMKTLSN
YTFDLKFQKPRLEQIRATMKSICFKENIKISTEQLDQLIESTSHDIRQVINHLSLLIDKF
ENVEQIKYKPNKDLKLGPWEVVKKVFNVEEHKNMNINEKSDLFFHDYNIAPLFVQENYLS
VMPATPKTELLERVAQAAESIALGDGIEKAIRSNNAWSLLPIQACFSSVIPGSMMSGHIQ
NQINFPAWLGCNSRRNKFDRLLQEITVHTRLTTGVSKEAVNLDYLNHIKDAIVRPLVNNG
TEGVDEAVNVMTQYHLLREDLDSLNEVSMWPGQRNSIQAVESKVLAAFTRTYNKNSPGLP
YSITTSKTKKSAMTSQEDLESIEVVEDDINSDEEEDNINLDKMIKAKKPTVKNKKETEEK
SSKKPTAKRGKGNNKKSNI
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggaattccgtattttctttctataaggagtttaaaaatgccacgtgatatacga
tcttattttacgagcactactgttaagaaatcaaaggatcagtcaacagataaatcagct
gataaacctacaattaaaactaaaaaaagggcaataatatcgtctgacgaagaggagaca
aaatcatcctctgtggtaaagcgtaccaaatatacaaaaacatttaacaagcatcatctt
ttatcagactctgacgatgagattcaaataacgtcgactgttaatagtaaaaaagtagaa
tcaattaataataccaaacaagaatcatatgtcaaagatgaattgaaaagcactatttcg
ccagcagaaatgtttagtaaagggtcggtgaggcgagaaaccatacagagaaaaataaag
aagaagaacgaaaaggaagatgacaaacttaacttaactaagttaaacacgaagaaatta
gaaaaagaatatttacaaaatgtcaaagaagatgacaatgagaaaaacagaacaaataat
acgatagatgatcgagcagaaaagaaaactaatagaacttcaaacgaaaaaaagaaagat
agtgtatccgtcgatgatgaaatatcttatagaaaaatagatacaaaacaagaagataaa
tcttctggtagtaaagaattatctttaactaatgaagagaataacgtcgatacaaaaatg
aaaaattttcccaaaaaagcatctaaacgtcctaaagctatttccacaatagaaatagaa
tctaaaaaagcgaaaaacgagaatgcacttaccaatagttcaacattagacgaatacgaa
gaaagaattcaaatgaaaaaacaaagttcaatgctatatcagaaatatcttaataggggt
ggagcgagaaatcctggttctaaggaaattccgcagggagcagaatattgcttagcaggc
ttaagttttgtaataacaggagttttggattcgttagaagatgaagaagctaaggaatta
ataataaaatatggtggtcgtattttgcatcaagtatcgagaaatacagattatctcata
gtaggtgaagaatatggacctgcaaaaatggctaaggccaatgagttaaaaataaaaaaa
atatctgaagatgatttgttagaattgatacgagaaagacctaaaggaaaagctgaagat
atcaaaaaatctcgttcaaaatctaaggaaaattcaatatcaaagatagaacatcatgaa
ataccaaaactgcaaaaaagtgttaaagaaacagtagaacctgtaaaagaaacagtagaa
cctgtaaaagaaacagtagaatctgtaaaagaaacagtggaacctgtaaaaaaaactgta
gaacctttaaaatctttggaaacaaaattagattctaaagttatagcaaatgatattgta
ataacaaaaggttgcgaagcattagttgacaaatacagaccgaaaagtacaaaacaaata
ttagggcaacaaggagataagagttgtgtgaaaaagttgcattattggttatcaaattgg
cataaaaatcgaaacaagaaatatgtaaaacctagtccctgggcaaaaaatgatgatgga
gcatattttagagctactctgctatcagggccacctggtattggtaaaactactagtgct
caagtagtatgtaatgaattaggtttcgatctattagaatttaatgcttcagatacaaga
agtaaaaaacttttaaaggaaagagtttccgaaattctatctaatacaacaataaaaaat
ttcttcacgggagaaaataatagtaaacacgtattgttaatggacgaggttgatggtatg
gctggtaacgaagatcgtggaggtttgcaggaattggttagcttaatcaaatctacggat
gtaccaataatttgtatttgcaatgatcgtactaatcccaaaatgaaaactctctccaat
tatacatttgatcttaaatttcaaaaaccgagattagagcaaatcagggcaacaatgaaa
tcgatatgtttcaaagaaaatatcaaaatatctactgaacaactcgatcaattaattgaa
tcaactagtcacgatattcgtcaagtgatcaatcatttgtcattattaattgataaattt
gaaaatgttgaacagataaagtataaaccaaataaggacttaaaattagggccttgggaa
gtagttaaaaaggtttttaacgttgaggaacacaaaaatatgaatattaatgaaaaaagt
gatctcttctttcatgattacaatatagcaccattgttcgtacaagaaaattatctttca
gtaatgcctgcaactccaaaaactgaattattagagagagtcgcgcaagcagcagagagt
atagcattaggagatggcatagaaaaagcaattcgaagtaacaatgcatggtcccttcta
ccaattcaagcatgtttttcttctgttattcctggtagtatgatgtctggacatatacaa
aatcaaattaattttccagcttggcttggatgtaattcaagaagaaataagtttgataga
ttattacaagagataactgtgcacacacgtttgactacaggtgttagtaaggaagcagtc
aatttggattacttaaatcatataaaagatgccattgttagacctttagtcaataacggt
actgaaggagtagacgaagcagttaatgttatgacacaatatcatttgttaagagaggat
ttagattccttgaatgaagtttctatgtggccaggacaaagaaattcaattcaagcagta
gagagtaaggtattagcagcatttactagaacgtataacaaaaactctcctggcctacct
tattctattactaccagtaagacaaagaaatctgcaatgacttcgcaagaagatttagaa
tctatagaagttgtagaagatgatataaattcagacgaagaggaagacaacattaattta
gataaaatgataaaagcaaaaaagcctacggtaaaaaataaaaaagaaacggaagaaaaa
agtagtaaaaaacctaccgccaaacgtggaaaagggaataataagaaaagtaatatttaa
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