Polistes canadensis: 106788749
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Entry
106788749 CDS
T05611
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
pcf
Polistes canadensis
Pathway
pcf03030
DNA replication
pcf03420
Nucleotide excision repair
pcf03430
Mismatch repair
pcf03440
Homologous recombination
pcf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106788749
03420 Nucleotide excision repair
106788749
03430 Mismatch repair
106788749
03440 Homologous recombination
106788749
03460 Fanconi anemia pathway
106788749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcf03000
]
106788749
03032 DNA replication proteins [BR:
pcf03032
]
106788749
03400 DNA repair and recombination proteins [BR:
pcf03400
]
106788749
Transcription factors [BR:
pcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106788749
DNA replication proteins [BR:
pcf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
106788749
DNA repair and recombination proteins [BR:
pcf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
106788749
MMR (mismatch excision repair)
106788749
DSBR (double strand breaks repair)
HR (homologous recombination)
106788749
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
106788749
NCBI-ProteinID:
XP_014607779
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MIPLTEGALDKIMAGDDIDNPIIQILGHKKLIGQNTGERYRLLVSDGKRVNSFTMLATQL
NSKITELTDFSICQVNRYAVSVVNNSGKQKRVMVILSIDVKVPGEQVGSKIGNPVNIDNN
ANGDAESMKSQTVKKPIPTPSSFSKSSSSDHASEITTTPIVALSPYQNKWIIKARVTSKS
NIITWSNSRGEGKLFSCDLIDESGEIRCTAFKDQCDKFYDMINAGQIYYISRCNLKAANK
QYSTLKNDYEMCMTSETEVIPCYDEANSIPRIQFDFIPINNIEIKEKNDIIDVLGIVKSC
EEIQMLKARNTGRELKKRDITLIDESNTMICLSLWGSEAEKFNGNNHPVIAIKGARIGEF
NGGKNLSTLMSSVLQIDPDIPEAHKLRGWYNTIGMSDQVKNLSTSNKSGIMNGEWLSLQD
AIDLLNDKKCSSVIYIGKLIVSSIRSENVIYKSCPVEGCKKKMIDQANGMYRCEKCNKEY
PSFKYKVLASINFCDWMTCQWAVAFSEEAEKVLNITSQELGELEENDHEQYLEKFSDVSF
KYFLVKMRMKLESFNDETRVRANCISISPMDFKTHSDVLLTKLKDIIGFEKL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgattcctttaacggaaggagctttagataaaatcatggcaggcgacgatattgacaac
ccaattattcaaatactaggtcataaaaagttaattggtcaaaacactggagaacgttac
agattattagtttctgatggcaagagagttaattcttttactatgttagccacacaatta
aattcgaagataacggagttgactgatttttctatatgccaggttaatagatatgctgta
agtgtggtcaataatagcggaaaacaaaaacgtgtgatggtgatattgagcatcgatgta
aaagttcctggcgaacaagttggttctaaaataggaaatcccgtaaatattgataacaat
gctaatggagatgcagaatctatgaaatcacaaactgtaaaaaagcctataccaacaccc
tccagtttttcaaaaagtagttcttctgatcatgcatctgaaataactacaactcctatt
gttgcattaagcccatatcaaaataagtggattatcaaagcaagagttactagcaaatct
aatatcataacgtggtccaattctcgaggcgaaggaaaattattttcttgtgatttgatc
gacgagagcggtgaaataagatgtacagcattcaaagatcaatgcgataaattttatgat
atgataaatgctggacaaatttattacatctcgcgatgtaatctaaaagcagcgaataaa
caatacagcactttgaagaatgattatgagatgtgtatgacttcagaaactgaagtaatt
ccatgttacgatgaagctaatagtattccaaggattcaatttgattttataccaataaac
aatatagaaattaaagaaaaaaatgatatcatagatgttttgggaattgtgaaatcttgc
gaagaaatacaaatgctgaaagcacgaaacacgggtagagaacttaaaaaaagagatatt
actttaatcgatgaaagtaatactatgatatgtttgagtttatggggctcagaagctgaa
aaatttaatggaaataatcatcctgttatcgctattaaaggggcacgtattggtgaattt
aatggtggaaaaaatctttctaccttaatgtcttccgttcttcaaatagatcctgatata
ccagaagctcacaaattacgtggatggtataataccataggaatgtctgatcaggttaaa
aatttatctacgagtaataaaagtggtattatgaatggagaatggttaagtttacaggat
gcgatagatttgttaaatgataaaaaatgtagttcagttatctacattggcaaacttata
gtttcttccattagatccgaaaacgttatttataaatcatgtccagttgaaggttgtaaa
aagaaaatgatagatcaagctaatggaatgtacagatgtgaaaaatgtaacaaagaatat
ccaagcttcaagtataaggttctggcaagtattaatttttgtgattggatgacttgtcag
tgggcagtggctttcagcgaagaagctgaaaaagttttaaatataacatcccaagaatta
ggtgaattagaggaaaacgatcacgagcaatacttggaaaaattttctgatgtctcattc
aaatatttccttgtgaaaatgcgtatgaaattagaatcgttcaacgacgaaacaagagta
cgtgcaaactgtatatccatatcaccgatggattttaaaacacacagcgatgtcttatta
acaaaactaaaagatattataggattcgaaaaactttaa
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