Polistes canadensis: 106789349
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Entry
106789349 CDS
T05611
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
pcf
Polistes canadensis
Pathway
pcf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106789349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcf03019
]
106789349
Messenger RNA biogenesis [BR:
pcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106789349
mRNA degradation factors
5'-3' decay
Decapping complex
106789349
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
106789349
NCBI-ProteinID:
XP_014608972
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MADSFFGFDTTILDGLEDGLDCPLEEEDFGEEEYDALNDETFGSEATIGDWEKDHEKLAE
ITESSRPQHKSVPDKKNGISVNIEDSLSHLVLDEKEGIVPKPGVWDSPSIIPLPKPRPPP
SLTTSLKNVCTVEELERGLIANRPPPGLIKPTQLQQKTDGSFIFDALSINDKLQINGLPP
SRFPPGLGLPGPHPIMMPPNLRLPHSPQFMQHPRLLSNQPGNVLRYPLPPHVMLPQGVQR
QPIHGPFTSNFHHPPYPNLGPPQFLRQDHPMMPPFPNNQVGQQHSFPHPVNQRNQNRLFY
SNEQGNHQPFFKNNQYLHRNHDRNNQRYYHYQHHNHPQGINGINNSGEYDEYAGLMSSRE
KQWLINIQLLQLNTNQPYVDDYYYTVFCDRQNKLNANQEQKDKKHNNNNGFQKDSRNRDQ
PQHVASKVVYIPAQFENSLGKLQFSSVTAPRKIIDMDVVPNSDPHSTLQSQQKDTKKTRQ
LFLEIERMYTILLKIEDINNPLAMLSEQQQQESETETNTVKKTGAELISMMWTSISQLIQ
DDKIASMLSIRKGKTLLLRFLPLINVIEYTSQLENLWACILRSLAIIGRRDSHLLTNFYP
EFRRWLNSVQNFNTVLRLTRALSETANQPVKNNSLVFAVVNKFGVSVLAAFLEHAEKLNP
TNETLSSDWSNFIITLAELIGDTPPCVTPCQPVAASTLNQHLRRILSLRIDRYSALELLL
TDANSSR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcagactcttttttcggtttcgacactacgattttagatggtttagaagatgggctt
gattgtcctttggaagaagaagattttggtgaggaggaatatgatgcattgaacgatgaa
acttttggttcggaggctaccattggagattgggaaaaagatcatgagaaacttgcagaa
attacagaatctagtaggccacagcataaaagtgttccggataagaagaatggtatcagc
gttaacatcgaagatagtttatcgcatttagtattagatgaaaaagaagggattgtacct
aagccaggtgtatgggatagtcctagtattataccattacccaaacctcgaccacctcct
tctttgacaacttccttaaaaaatgtatgtacagtggaagaattggaaagaggtcttatc
gctaatagacccccacccggtcttataaaaccaactcaactacaacaaaagacggatggg
tcttttatttttgatgcattgtcgataaatgacaaacttcaaatcaatggcttacctccc
tctcgatttccaccaggattgggtctacctggtccgcatcctattatgatgccaccaaat
ctaagattaccacattcaccacaattcatgcaacatcctagattattatctaatcaacct
ggtaacgtattgcgatatccactaccaccacatgttatgctaccgcaaggagtacaaaga
caaccaattcatggaccatttacaagcaattttcatcatccaccttatcctaatttagga
cctccacaattccttcgtcaagatcatccaatgatgcctccatttccaaataatcaagtt
ggtcaacaacattcttttccacatcctgtaaatcaaaggaaccagaatagattattttat
tccaatgaacaagggaatcatcagccattttttaagaataatcaatatcttcatcgtaat
catgatagaaataatcaaagatattatcattatcaacatcacaatcatcctcaaggaata
aatggcattaataattctggagaatatgatgaatatgctggtcttatgagtagcagagaa
aaacaatggttaatcaatatccaattactccaattaaatacgaatcaaccatacgttgat
gattattattacacggtattttgtgatagacaaaataaattaaacgctaatcaagaacag
aaggataaaaaacataataacaataacggatttcaaaaagattctagaaatcgcgatcaa
cctcaacatgttgcatcaaaagttgtatatatcccagcacagtttgagaattcattaggg
aagctgcaattcagtagtgttacagcacctcgtaaaattattgatatggatgttgttccc
aatagtgatccgcattcaacattacaatctcaacaaaaagacactaaaaagacgagacaa
ttgttccttgaaattgaaaggatgtatacaatactgttaaaaattgaagatataaataat
cctttagctatgctatcggaacaacagcaacaagaaagtgaaacagaaacaaacactgtt
aaaaaaacaggtgctgaattaatttcgatgatgtggacatctatttctcagttaatacaa
gatgacaaaatagccagtatgcttagtattcgtaaaggaaagacactgctattgagattt
ttacctctaataaatgtaatcgaatacactagccaattggaaaatttatgggcctgtata
ttaagaagtttagcaattattggtcgtagagactcacatttattgacaaatttttatccc
gagtttcgaaggtggcttaatagtgtacagaattttaatacagtacttcgactaacaaga
gcattatctgaaacagctaatcaacctgtgaaaaataatagtttagtttttgctgttgta
aacaagtttggtgtatctgtattagccgcatttttggaacatgcagaaaagttaaatcct
acaaatgaaactttatcttctgattggtccaattttataataactcttgctgaactaatt
ggtgatacaccaccttgtgtaactccctgtcaaccagttgctgcaagtacacttaatcaa
cacttgagacggattttaagtttaagaattgacaggtacagcgcattagaacttttgtta
actgatgccaactcttcacgatag
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