Polistes canadensis: 106789402
Help
Entry
106789402 CDS
T05611
Name
(RefSeq) mutS protein homolog 4-like
KO
K08740
DNA mismatch repair protein MSH4
Organism
pcf
Polistes canadensis
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcf03036
]
106789402
Chromosome and associated proteins [BR:
pcf03036
]
Eukaryotic type
Meiosis-specific proteins
Others
106789402
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
106789402
NCBI-ProteinID:
XP_014609052
LinkDB
All DBs
Position
Unknown
AA seq
1127 aa
AA seq
DB search
MNVIRNDTAAPVRGKVRGRGRGKVGGEMITNVLPKYRFDFGIRKPLVELCPTNSNTVRTN
VHRNLKSASTSSFLPSSTRRGSAGSNTTRTPGSYTSTESCIILAVTSGRGEARGEVGIAA
IDVHHSHLILCQMSDYQTYINTLTKIYIFNPIEILMPDTMCNETKNRNKLYLSIKEKFPN
LCITAVSRIHFNESVGLDRVKTHCAKEYSTVELFLKQKYYALAAASALLKYIEFIQHIVY
APKSIRIEFQGSPNTTVIDIESAQSLELVVSQCGQQNASLLSSMDHCVTPIGRRLLRASI
LQPLCNEEIIIERQNSIAELVSNRLLCNLVQPFVRRLYGADRLLSLSMMTLQNNTVQNAE
RNLNYVLLLKNSLEIVPELREALKSGRASFFAKIRKNLENSQFEIMKNKILQIIHPDARS
LIGYTSSNMQRCFAIKPGINDLLDIARQTYCELISDMKNLVENLAIQYKLNLSLECNSSL
GFYILAEISRQMDFKPSDLPSEFVQVQKNKNTYSMTTNKLLVLSHQCKIACEDLHIMSNA
ILNDLLVNIREHIGCLYQLSADVAELDLVISLAHISSSPEYVKPKFGPRLELIDSLHPIM
AVFGVEQPVPNDVHASIPYNYHTIIGPNMSGKSIYLKQIVLLHIMAQIGCYVPAKKAEFR
ITDRIFCRICFRDDIECNASTFVVEMKEAQYILQSITSKSLVILDELCRGTTVEEGSSIT
LAICERLLITTAFTFSATHFRYLTKLAEIYYNVTNHCFKTDTKFTEGLNEARLVYTHKLM
VGVTPIDNYGIALAEVSGLPVSITSKAREYAQKEVTKMKRDDYFTEPNSWEKTCYDRVAA
MYKLIENNEFNRKNVVGLIHELDVCYTAEFKKMQQEEKALCEALESFESTQLAEPAQPAQ
STQSAHLNWHNMEMSSKNQLNDTAATYFDMNTTVRMETNETEEVNSRRNLNKQFRDLVDE
NQQNSFGTQSWFIKDTDLKTLNQNPSFVTRSPHSSPFKINKTSNQITTMMNTTSKLFFTS
DELLKKQTDLNTSIKSVPTLFKFDPPNIVDKKDAASMETMSVMSPIISFRCSQISQFHKN
SLMESEADLSLTNATILTDFTGINTSDRQINIFTKPDNNVFEKLEFS
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttatacgcaacgatactgcggctcctgtgagaggaaaagttagaggaagagga
cgaggaaaagtaggaggagaaatgataaccaatgttttacctaaatatcgctttgatttt
ggaattagaaaaccattggtcgaactatgccccacaaattcaaatactgtaagaacgaat
gtgcatcgaaatttaaaaagtgcatccacatcttcatttcttccaagttcaactcgtaga
ggaagtgcaggatcaaatactacaagaacgccaggaagctatacatcaacggaatcttgt
atcatactcgctgtcacatctggtcgtggagaagctagaggagaagtaggaatagctgca
atagatgttcaccattcgcatttaattctttgtcaaatgagtgattatcaaacatacata
aatactttgacaaagatttatatatttaatccaattgagattttgatgccagatacgatg
tgcaacgaaacgaaaaatagaaataaattgtatttatctatcaaagaaaaatttcctaat
ttatgtatcactgcggtatcaagaattcattttaatgaatctgtcggtttggaccgtgta
aaaacacattgtgccaaagaatattcgacagtggaattatttttaaagcaaaaatattac
gcgttagcagcagcctcagctttgttaaagtatatcgaatttattcagcatatcgtttat
gcaccaaaatcaatcagaattgaatttcaaggttcacccaataccacagttatagacata
gaaagtgcacaaagtttagaattagttgtgtcacaatgtggtcaacaaaacgctagcctt
ttaagttcaatggatcattgcgttaccccaataggtagaagacttttaagagcatctatt
ttacaacctctttgcaatgaagaaataattatagaacgtcaaaatagcattgctgagtta
gtttctaatcgtttattatgcaatctcgttcagccttttgtaagaagattatatggtgct
gatcgtcttctgagtctttccatgatgactttacaaaacaatactgtacaaaatgcagaa
agaaatttaaattatgttcttttattaaaaaattctcttgaaatagtaccagaattacga
gaagcgcttaaaagtggtcgtgcttcattttttgctaaaattcgaaaaaacttggagaat
tcacaatttgaaataatgaaaaataaaattttacaaataatacatcctgatgcaagatcc
ctaattggatatacgtcatcaaacatgcaacgatgttttgcaattaagccaggaattaat
gatttattggatattgctcgacaaacatattgtgaactcataagtgatatgaaaaatctc
gtagaaaacttagcgatacaatataaattgaatttatcattggaatgcaattcatcctta
ggattttatatattagcagaaatatctcgacaaatggatttcaagccatccgatttacca
tcggaattcgttcaagtacaaaaaaataaaaacacctattctatgacgacaaacaaatta
ttggtattaagtcatcaatgtaaaattgcttgtgaagatcttcacataatgagcaacgcg
attttgaatgatttactcgtgaacattcgcgaacacattggttgcctttatcaactaagc
gctgacgttgcagaattagatttagttatttctttagctcatataagttcatctcctgaa
tacgtaaaaccgaaatttggaccaagattagaactaatagattcgttacatcctataatg
gcagtattcggggtagaacaacctgtaccgaacgatgtgcatgcatcaataccttacaat
tatcatacaataattggcccaaacatgagtggtaaatctatttacctaaaacaaattgtt
ttattacatatcatggcacagattggttgctatgttccagcaaaaaaagcagaatttcga
attactgatcgtatattttgtagaatatgctttcgtgatgacatagaatgcaatgcttca
acatttgttgttgagatgaaagaagcacaatacatactacaatcaattacatctaaatct
ttagtgatcttagacgaactttgcagaggtacaactgtcgaagaaggttcttctattaca
ttggcaatatgcgaacgacttttgattaccacagcgtttactttcagcgctacacatttt
cgttatctcaccaaattagctgaaatatactacaacgtcacaaatcattgcttcaagact
gatactaaatttacggaaggtttaaacgaagcccgattagtatacacgcataaattaatg
gtaggtgtaactcccatagacaattatggtattgcattagccgaagtatcaggtcttcct
gtttccatcactagcaaagctcgagaatatgcacaaaaagaagttactaagatgaagaga
gacgattattttaccgaaccaaattcatgggagaagacgtgttacgatcgtgtcgcggca
atgtataaactcatagaaaataacgaattcaatcgtaaaaatgtcgtcggacttatacac
gagcttgatgtttgttatactgctgaatttaaaaaaatgcaacaagaagaaaaagctttg
tgcgaagctttggaaagtttcgaatcgactcaattggctgaaccggctcaaccagctcaa
tccactcaatcggctcatttaaattggcataatatggaaatgtcttctaaaaatcaattg
aacgatactgcagcaacttattttgacatgaatacaactgttaggatggaaactaatgaa
acagaagaagttaactcgagacgaaatttaaataaacaatttagagatctggtcgatgaa
aatcaacaaaattcatttggaacgcaatcatggttcattaaagataccgatttaaaaaca
cttaatcaaaatccgagctttgttacccgttcaccacactcgagtccatttaaaattaat
aaaactagtaatcaaataacaactatgatgaataccacttcaaaattattttttacttcg
gatgaattgttaaaaaaacagacggatttaaatacttctataaaaagtgtaccaacactt
ttcaaattcgaccctccaaatattgtcgataagaaagatgccgcgtctatggaaaccatg
tcggtaatgtcaccgataatttcttttagatgttcacaaatttcgcaatttcataaaaat
tccttaatggaatcagaagctgatctttctttaacaaacgcaacgatattgacagatttt
acaggaattaatactagtgacagacaaataaatatttttactaaacccgataataacgta
ttcgaaaaattggaattttcttaa
DBGET
integrated database retrieval system