Polistes canadensis: 106789652
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Entry
106789652 CDS
T05611
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
pcf
Polistes canadensis
Pathway
pcf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106789652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcf03009
]
106789652
Ribosome biogenesis [BR:
pcf03009
]
Eukaryotic type
Pre-60S particles
RNases
106789652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
REX3_middle
Motif
Other DBs
NCBI-GeneID:
106789652
NCBI-ProteinID:
XP_014609545
LinkDB
All DBs
Position
Unknown
AA seq
1214 aa
AA seq
DB search
MLPSTGYFKTINCPFYENGLCERPYCHFKHAKREDAGNTAGMVGVVETQATGQTQTKSNA
AIAASNSDMLQQLVTEAVKKVLADQEVTDTDKFSKTIVSQVVEGLKKPSLTSDSASSSDT
TTSNIIGKHMNIPTTITKPVPCVYNPTPIAELKKRHIPVVSYMPTRENRVAVKRKSSPDR
IKPWLSIIKDPTSSQTTEITYKPTAISCINDQDSIQSYIPTFKSDSSSSNSYEDSNSNDN
IPKVKEAYYPKSKKRREEYVPKKVKAPLKNVQQLDDTVLDQFEPEFDMIGEILTAATTAL
STVPSEESQDYCLDIEPKFSDDEPMPDDTKEKYESNVYKSSLCNNEKKSRDNVHDSKTVD
KKRKLDEVENELINNHHNIDDTVDDKTKSKKRRESSDNVKEKHKERRKDEDRIKKDHRSS
SRSSDKHKKDHNRSGKSSKESKSYKSSSSDKRHSSSSSSSHKDKEKNKNSHSSKESTHKS
KERSSHKDKDSSAERSNKDKHKSSKHDKHKSKTYNSSSKSDKHSSSKSHRNHRSRSHHRS
RSRDRMRSPSKKDKHEEENDDNKINTLLNERESLSPAESLPGSFENIIFDSSDSETDVQE
ECLKIFQEYKVSNHPKVVSIKESAKVVEIEENEEFGKKRVAHPSAAMSMVSRQVGPSQPP
KRLPNPQQKMYERWRLMREAAAEKAAEKAAGKMASNVTKTQITPTPVIQQPANNVNDESV
ESVSTINNNEFQMNGHGRIRIAHVPYAMSLAMKKKQVKENIVKTNDSKAIDNKTIAQTSK
GGVRVAHVSQVVPQLIRPEPLQPMTQKFPLNVRQYYINIMQDICVQIYTNGDDAAQRAVR
EEFTCHEKCKALTVYKNSCMLAAHRLRKEVDQNRSSDGSNTTASGTVSHEAVLAGKSKGS
WSVLRTKKAITDFKGSALYSMLKKWIMTEEQLQDNGFPRAHPEGTKGRAKVYVINSRNQT
VLSKVPNERICSRCGQNYMVDKQGFPVQQQNCIYHWGRKFTIKGEGKYSCCQQYGSATGC
CDAKFHVWNYTDYENLRGYIKTLPKDIAEEEQGVYALDCEMCYTTQGLELTRITVINDEC
NVIYETLVKPQNPIVDYNTRFSGITENDMTDVTTTLLEVQATLLAMFSNKTILVGHSLES
DFKALRLLHDTVVDTSVMFPHRNGYPQKRALKNLCSEYLRKIIQNDVGGHDSKEDAVACM
ELVLWKVKEEAKLQ
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgttgccttcgaccggttatttcaaaacgatcaattgtccgttttacgagaacggatta
tgcgaaagaccttattgtcattttaaacatgccaaaagagaagatgcaggaaatacagca
ggaatggttggagtggtggagacccaggcaacgggtcaaactcaaacaaaatcaaatgca
gccattgctgcttccaattcagatatgttacaacaattagtaactgaagctgttaaaaaa
gtgctcgcagatcaagaagttacggacactgataaattctctaagactatagtttcgcaa
gtggtagaaggacttaagaaaccttccttaacttctgactctgcttcatcatctgatacg
actactagcaatattatcggcaagcatatgaatattccaacaaccattacaaaaccagtt
ccttgcgtctacaatcctacacccatagctgaattaaagaagaggcatattcctgtggta
tcttatatgccgaccagagaaaacagagttgcagtcaaacgtaaatcttctccggataga
attaaaccttggttaagcattatcaaagatccgactagttcacagaccacagagatcact
tataaacctaccgctatctcttgcatcaatgatcaagattccatacagagttatatacca
acttttaagtcagattcgtcttcttccaattcgtacgaagatagcaattccaatgacaac
atacccaaagtcaaagaagcttattatccgaaatctaagaagagaagggaagagtatgtc
cctaaaaaagtcaaagctccgttaaagaacgttcaacaattggacgatactgtgttagat
caatttgagccagaattcgatatgatcggagaaatattaactgctgcaacaacagctctt
agcacagtacccagcgaagaatctcaagattattgtttagatatagaaccaaagttttcc
gacgacgaacccatgccggatgataccaaagaaaaatatgaatctaacgtttacaaaagt
tctctttgtaacaacgaaaaaaagtctagggataatgtacatgattcgaaaactgtcgat
aagaagagaaaacttgacgaggtagaaaatgaactgattaataatcatcataatatagac
gacactgtcgacgacaaaactaaaagtaagaaacgaagagaatctagcgacaacgtgaaa
gagaaacataaggaaagaagaaaagatgaagatagaataaaaaaagatcatagaagtagt
agtagaagtagtgataaacacaaaaaggaccataatcgctcaggaaaaagtagtaaagaa
agtaagagttataaatctagttcgtctgataaacgacattcgtcgtcgtcctcttcctcg
cataaagacaaagaaaaaaataagaatagtcactcttctaaagagtctactcacaaatca
aaagaacgttccagtcacaaagacaaagattcatccgctgaaagatcgaataaagataaa
cataaaagtagtaagcatgataagcataaatctaaaacgtataactctagttccaaatct
gataaacattcatccagtaagagtcatagaaatcatcgatcaagatcgcatcatcgatcc
agatcgagagatcggatgcgtagtccatctaaaaaagacaagcacgaagaagaaaatgac
gacaacaaaattaatacattactgaatgaaagagaatctctcagtccggccgaatcctta
ccaggttcttttgagaatattattttcgattcgtccgattccgaaactgatgtgcaagag
gaatgccttaaaatctttcaagaatataaagtttctaatcatccaaaagtagtctccatc
aaagaatctgctaaagtagtagaaattgaagagaatgaggaatttggtaaaaagagagta
gcgcatccttctgcagcaatgtcaatggtatctcgtcaagttggtccgagtcaaccacct
aaaagattacctaatcctcaacaaaaaatgtatgaaagatggcgtttgatgagagaagca
gctgcagaaaaggcagcagaaaaagctgctggaaaaatggcatctaatgttactaaaact
caaattacacctactccagtaattcaacaaccagctaataatgtcaacgacgagtcagtc
gaatctgtttctacgataaataataacgaatttcagatgaatggacatggtcgaattaga
attgctcatgtcccgtatgctatgtctcttgcaatgaaaaagaaacaggttaaagaaaat
atagtcaaaaccaatgactctaaagcaattgacaataaaacaatagcccaaactagcaag
ggtggtgtacgagttgctcacgtttcacaagtggtaccacagctaatacgtccagaacca
cttcagccaatgacacaaaagttcccattgaacgtacgtcagtattatatcaatataatg
caagatatatgtgtacaaatttatactaatggcgatgatgctgcccaacgtgctgtacga
gaggaatttacctgtcacgaaaaatgtaaagcgcttacggtatacaaaaattcttgtatg
ttagctgcgcatagattgagaaaggaagtcgatcaaaatcgttcctcggatggcagtaac
acgacagcaagtggtaccgtatcgcacgaagctgtacttgctggtaaatccaaaggttct
tggagtgtcttgagaacaaaaaaagcaataactgattttaagggttcagcattgtatagt
atgttaaaaaaatggattatgacagaagaacaattacaggataatggatttcctcgtgct
catccagagggtactaagggacgtgctaaagtttatgttataaactcgcgtaatcaaacc
gtgctatcgaaagtgcctaatgaaaggatctgtagtcgttgtggacaaaattatatggta
gacaaacagggctttcctgtacagcaacagaattgtatatatcattggggaagaaagttt
acgattaagggagaaggaaaatatagttgttgtcaacaatatggatctgctactggttgt
tgcgacgccaaattccatgtatggaattatactgattatgaaaatcttcgcggttatata
aaaaccttaccaaaagatattgctgaagaagaacaaggagtctatgcgctcgactgtgag
atgtgttacactacccaaggattagaattgacaaggataacggttattaatgacgaatgt
aacgtcatatatgaaacattagtcaaacctcagaatccaatagtcgattacaatacaagg
ttctcagggattacagaaaatgatatgacagatgtgacgacaacgcttttagaagtccaa
gctacgcttctagcaatgttctctaataaaactatactagtaggtcatagtcttgaaagt
gatttcaaagcactgaggttacttcacgatacagtggtagataccagtgtcatgtttcct
catagaaatggttatcctcagaaacgagcactaaaaaatctttgttctgaatatttaaga
aagatcatacaaaatgatgttggtggtcacgacagtaaagaggatgccgtagcgtgtatg
gaattggtgctgtggaaagttaaagaagaagctaaattacaataa
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