Polistes canadensis: 106789757
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Entry
106789757 CDS
T05611
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pcf
Polistes canadensis
Pathway
pcf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106789757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcf03021
]
106789757
03036 Chromosome and associated proteins [BR:
pcf03036
]
106789757
Transcription machinery [BR:
pcf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106789757
Coactivators
SAGA/TFTC/STAGA complex
106789757
Chromosome and associated proteins [BR:
pcf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
106789757
STAGA complex
106789757
TFTC complex
106789757
SAGA complex
106789757
SLIK complex
106789757
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_1st
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_EIPR1
PEP5_VPS11_N
Beta-prop_HPS5
WD40_like
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_NWD2_C
Beta-prop_RSE1_2nd
Beta-prop_DCAF12
Cytochrom_D1
VPS8_N
Motif
Other DBs
NCBI-GeneID:
106789757
NCBI-ProteinID:
XP_014609719
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MENEKNTMLAILQFLKKYNLKGTEELFRKEANLTDVTADETEQTDSEVSSVLSAYKSEGD
PALYEKAYSELKKFVESSLDIYKHELGTILYPVLVHMYLELVYNNHSEEAKQLIAKFGGN
LEEYYQADLKRLSNVTKREQMAGNELTDTFKSNQFIIRMSRDTLSILKRHLQEKKHSVLL
NIIQEHLYFDMYEGVARNKQQIEATSGAVVGEATRQDNKTKVYYGLLKEPDIQCVPPAEE
EEDDVVGADGDKPKKKKAKKDPLFSKKTKSDPNAPSVGRMPLPNLKDVDKLEKVKAMREA
SKRVVLGPDTLPSICFYTLLNTVHTVTAAEISEDSSLLAVGFSDSTIKVWSLVPQKLRHM
KSGEQLQDIDREADDVLVRMMDDRTAEITRSLYGHSGPIYNLSFSPDRSLLLSCSEDATV
RLWSLHTWTCVVCYKGHLFPVWCTKFSPHGYYFATASHDKTARLWATDCHQPLRIFAGHY
SDVDVVQFHPNSNYIATGSSDMTVRLWDCVNGSQVRLMTGHKAPIYSLAFSAEGRFLASA
GADHRVLVWDLAHGHLVAALSSHTGSIHCLSFSRDGNILVSGSLDCTIILWDFTKLAEEM
SLEDVNVSHNPDVKTNAEAYLLRTFPTKNSPVLALHFSRRNLLLGVGMFDST
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgaaaagaatactatgcttgctatcctgcaatttcttaagaaatataacttg
aagggaaccgaagaattatttaggaaagaagcaaatctaacagatgtaactgcagatgaa
actgaacaaacagattcagaagtaagcagtgttctgtcggcttacaagagcgaaggtgat
cctgcactatatgaaaaagcatatagtgaattaaagaaatttgtggaaagttctttagat
atatacaagcacgagttgggtacgatattgtatccagtattggtacatatgtatctagaa
ctagtatataataatcattcggaagaagctaaacaattgatagcaaagtttggaggaaat
ttagaagaatattatcaagctgatttaaaaaggctttcgaatgttactaaacgggaacaa
atggcaggcaatgaattgactgatacattcaaatctaatcaatttattataagaatgtcg
agggatactttatcgatattaaaaagacatttgcaagaaaaaaagcacagcgtgttgttg
aatattatacaagaacatttgtattttgatatgtacgaaggagttgctcgtaataaacaa
caaattgaagctacttcaggtgctgttgtgggtgaagcgacaaggcaagataataaaacg
aaagtttattatggccttttaaaggaaccagatattcaatgtgttccaccggccgaagaa
gaagaagatgatgtagttggtgcagatggagacaaaccaaaaaagaaaaaagctaaaaaa
gatccgctattttcaaaaaagaccaaatcagatcctaatgcaccatctgtaggtagaatg
ccattaccaaatttaaaagatgtagataaattggagaaagttaaagcaatgagagaagca
tctaaaagagttgttcttggtcctgacacattgccttctatttgcttttacacgttactt
aatactgtacataccgtaacagcagctgaaatatcagaagattcaagtttattagctgtt
gggtttagtgattctactattaaagtatggagtttagttccacaaaaattaagacatatg
aagtctggtgaacaattacaagatattgatagagaagcagatgatgtattagtcagaatg
atggatgacagaacagcagaaataacgagatcgttgtatggacatagcggaccaatatac
aatctctcctttagtccagatagaagtcttttactttcatgttcagaagatgctacagtg
agattatggtcacttcatacatggacatgcgtagtttgttacaaaggccatttatttcct
gtatggtgtacaaaattttcacctcatggttattattttgcaacagcctctcatgataaa
acagctagactttgggcaaccgattgtcatcagcctcttagaatatttgctggccattat
tctgacgttgatgtcgtgcaatttcatcctaattcaaattacattgcaaccggctccagc
gatatgaccgtgagattatgggattgcgtaaacggtagtcaagtaagattaatgaccggt
cataaagctccaatatattctcttgctttttcggccgaaggacgattcttagcatcggct
ggtgcagatcatcgtgtgctggtatgggatttagcacatggtcatcttgtagctgcttta
tctagccacacaggttccatacattgtttatctttcagtagagatggaaatatattagtt
tcgggttccttggattgtactataatattatgggattttacaaagttagcagaagaaatg
agcttggaagatgttaacgtctcgcataatcctgatgtaaaaaccaatgctgaagcttat
ttattgcgaacatttccaacaaaaaattctccagttttagctttacatttttctagaaga
aatttactgttaggagttggaatgttcgattctacgtga
DBGET
integrated database retrieval system
