Polistes canadensis: 106789877
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Entry
106789877 CDS
T05611
Name
(RefSeq) DNA polymerase beta-like
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
pcf
Polistes canadensis
Pathway
pcf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106789877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcf03400
]
106789877
Enzymes [BR:
pcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
106789877
DNA repair and recombination proteins [BR:
pcf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
106789877
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
106789877
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_5
HHH_3
HHH
NTP_transf_2
Cdd1
HHH_2
CCDC50_N
DUF4460
DUF7269
Motif
Other DBs
NCBI-GeneID:
106789877
NCBI-ProteinID:
XP_014609890
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
MGKRKAPDNAGNPNQDLCDFLLELANYEKNVSKNVYKYNAYRKAASSLSTLSDRVKSGEE
ARKLPGIGEKIAKKIDEFLQTGKLRKLEEINKNDDNVAINLLTRVSGIGPAKAKELVDDG
IKSLDDLKKHQNKLNHHQKLGLKYFDDFEKKVPRAEITEIEKMLKKYIYELSKEYIITIC
GSYRRGKKESGDIDALITHPNYISINKESKKKNSDMLKNIVEYLEKKRLITDTMSIGPTK
FMGVCRVSNDKNKSFRRLDIRLVPYDQYYCAILHYTGSDLFNKNIRAHALEKKYTLNEYT
LKRLTVEGIPGEAEKITCEEDIFKILGLPYKEPKNRDL
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaagaaaagcaccagataatgcaggaaatcctaatcaagatttatgtgatttt
ctattagaactggcaaattatgaaaaaaatgttagtaagaatgtatacaaatataatgct
tatcgtaaagcagctagtagcttgagtactttaagcgacagagtcaagagcggagaagaa
gctagaaagttgccaggaataggagaaaaaatagctaaaaagatagacgaatttcttcaa
actgggaaattacgcaaacttgaagaaattaataaaaatgatgataatgttgcaatcaat
ttgttaacccgtgtttctggtattggtcctgctaaagcaaaagaattagttgatgatggt
attaaaagtttggatgatttaaaaaaacaccagaacaaattgaatcatcatcaaaaactt
ggtttaaagtattttgatgattttgagaaaaaggtacctagagcagaaataactgaaatt
gaaaaaatgttaaagaaatatatttatgaattgagtaaagaatacattattactatatgt
ggaagttacagacgtggtaaaaaagaaagcggagatattgatgcattgataactcatcca
aattatatttccataaataaggaatcgaaaaaaaagaatagtgatatgcttaaaaatatt
gttgaatatcttgaaaaaaaacgtttaattacagatacaatgtctattgggccaacaaaa
tttatgggtgtttgtcgtgtgtcaaatgataaaaataaatcattcagacgtttggatata
agattggtaccatatgatcaatattattgtgctatacttcattatactggtagcgatctt
tttaataaaaacataagggctcatgcgttggagaagaagtatacattaaatgaatatact
ttaaaacgacttacagtagaaggtatcccaggagaagctgagaaaatcacatgcgaagaa
gatatttttaaaatacttggacttccttataaagaaccaaagaatcgagatctttaa
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