Polistes canadensis: 106790273
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Entry
106790273 CDS
T05611
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pcf
Polistes canadensis
Pathway
pcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106790273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcf03041
]
106790273
03009 Ribosome biogenesis [BR:
pcf03009
]
106790273
Enzymes [BR:
pcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106790273
Spliceosome [BR:
pcf03041
]
Complex A
U1 snRNP components
U1 related factors
106790273
Complex B
106790273
Ribosome biogenesis [BR:
pcf03009
]
Eukaryotic type
Pre-60S particles
Helicases
106790273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
106790273
NCBI-ProteinID:
XP_014610533
LinkDB
All DBs
Position
Unknown
AA seq
768 aa
AA seq
DB search
MYTTGYSNQTSYRSRGGTRDFSNRNVGTTAYWNGQQQPQKEFNAKKQNPNQKKIPGDLLK
KPNWDLAALPVITKNLYIPHVNILKRTSEEISKYHSGKEITVKGNNTPPPIQAFEESNFP
DYVMEEIKKQGFAEPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPATVHINNQPRL
SRGDGPIVLVLAPTRELAQQIQSVAKDFGSSSCIRNTCIFGGSPKGPQARDLERGVEICI
ATPGRLIDFLEKGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW
PKEVQALAEDFLTDYIQINIGSLTLAANHNIRQIIEICQEHEKESKLSNLLREISGERGS
KVIIFVETKKKVDDITKSIKREGWSAISIHGDKSQPERDYVLSEFRNGKTMILVATDVAA
RGLDVEDVKYVINFDYPNSSEDYIHRIGRTGRCQSAGTAYAYFTSNNARQAKELISVLEE
AGQVINPQLADMANSIRNQFGKGRQRWSYGRFTKDNNSGGSPRNNTSPTINSWQNHQSQT
NQHQIVRNPQRINIHQQQNDYQNTRQNSYQQSAYQLQPQPQQHQPQQHQQQQQPVHNQHQ
QQQQQQQQQQQQQQHQQQQQQQQQQQQQQQHQQQQQQQQQPQQRQPNNNFHQSGYQSNGS
ACQPAYQNSNRYQVRPSNGYQGSRYNARQNGYSNGQSSQNVYSMPPTFIMPSGGHTDSGI
QSLVNNKFFQTNRPPPNTGACAYQSMGYGQFQAVPPYGYPYPPTQVQQ
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtataccacaggctatagcaatcaaacaagttataggtcaaggggtggtactagagat
ttcagtaatcgaaatgttgggacaacagcatattggaatggtcaacaacaacctcagaaa
gaatttaatgctaagaaacaaaacccaaatcaaaagaaaataccaggagatttattaaaa
aagcctaactgggatttagctgctcttccagtaataacaaaaaacttgtatattccacat
gttaatattttaaaacgaacatcagaagaaatcagcaaatatcattctggcaaagagatc
actgttaaaggaaataatactccgcctccaattcaagcttttgaagaaagcaatttccca
gattatgtaatggaagaaataaagaagcaaggatttgctgaacctactgctatacaagcc
caaggatggccaattgcattaagtgggcgtgacatggttggaattgcacaaactggctca
ggcaaaactttagcgtatatccttcctgcaactgtacatattaacaatcaacctcgatta
agtcgaggtgatggtccaatcgttttagttcttgctccaactcgagaattagcacaacaa
atacaatcagtagctaaagatttcggttcttcatcatgtattcgaaatacgtgcattttc
ggaggttctccaaaagggccacaagcaagagatcttgaaagaggagttgaaatttgtatt
gctacaccaggcaggcttattgactttctggaaaaaggaacaacaaacttgcgaaggtgc
acatatcttgttcttgatgaggctgacagaatgttagatatgggatttgaaccacaaatt
agaaagattatcgaacaaatcagaccagatcgtcaagttctaatgtggtcggcaacatgg
cccaaagaagtacaagctcttgcagaagattttcttaccgattatattcaaatcaatatt
ggttcgttgactttggctgcaaaccataatattcgtcagataattgaaatttgtcaggaa
catgaaaaagaatccaaactgtccaatttattgagagaaatcagtggtgagcgtggaagt
aaagtaattatttttgttgaaactaaaaagaaagtagatgatattacaaagtccattaag
cgagaaggttggtcagctatctctattcacggtgacaaatcacaacccgaacgagattat
gtattatctgaatttagaaatggaaaaactatgatcttagttgcaacagatgtagctgca
cgtggcctggatgtagaagatgtcaaatatgttattaatttcgattatccaaatagttcg
gaggattatattcatagaataggtcgtactggacgatgccaaagtgcgggaacagcttat
gcttatttcacttcgaataatgcgagacaagctaaagaattaatatctgttttggaagaa
gctggtcaggtaataaaccctcaattagcagatatggctaattctataagaaatcaattt
ggaaagggtcgacagcgttggagttacggtcgctttacaaaggataataattcaggagga
agtcctagaaataacactagccctaccattaatagttggcaaaatcatcagagtcaaacc
aatcaacaccagattgttagaaatccacagagaatcaacatacaccaacagcaaaatgat
tatcaaaacactcgtcaaaactcctaccagcaatctgcataccaattacagccacagcca
cagcaacatcaaccacaacaacatcagcagcaacagcagcccgtgcataatcagcatcaa
caacagcaacaacaacaacaacaacaacaacaacagcagcagcatcaacaacagcaacaa
caacaacaacaacaacaacaacagcagcagcatcaacaacagcaacaacaacaacaacaa
ccacaacaacgtcaaccaaataataattttcatcaaagcggatatcaatctaatggtagt
gcttgtcaaccggcatatcaaaatagtaatcgatatcaagtcagaccaagcaatgggtat
caaggaagtcgatacaatgctagacaaaatggatatagtaatggtcaaagcagtcaaaat
gtatattcaatgccaccaacattcatcatgccatcaggtggacataccgattccgggata
caaagcctcgtcaataacaagttcttccaaacaaaccgaccacctccgaatacaggagct
tgtgcttatcaatcaatgggatatgggcagttccaagctgtgccgccatatggttatcct
tatccaccaacacaggtacaacagtga
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