Polistes canadensis: 106790700
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Entry
106790700 CDS
T05611
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
pcf
Polistes canadensis
Pathway
pcf03008
Ribosome biogenesis in eukaryotes
pcf03013
Nucleocytoplasmic transport
pcf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106790700
03015 mRNA surveillance pathway
106790700
03008 Ribosome biogenesis in eukaryotes
106790700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcf03019
]
106790700
03009 Ribosome biogenesis [BR:
pcf03009
]
106790700
Messenger RNA biogenesis [BR:
pcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106790700
mRNA cycle factors
Stress granule specific factors
106790700
Ribosome biogenesis [BR:
pcf03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
106790700
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
TAP_C
NTF2
LRR_8
Tap-RNA_bind
DUF4817
Motif
Other DBs
NCBI-GeneID:
106790700
NCBI-ProteinID:
XP_014611280
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MQRNLGIPHSYTLDSSMAIKLVIGQNNNYPEQMLIESLNIWHEFKIIRGAQYNKEDVLKA
ILNSVEPAYLLPVKYQVRGEDSYFIASNCGPAIESLCRSSLIVKNPHGNPLILTIVLGFA
SVSDLTINIQPLILNTLTKRYDFNKKLLDLEAFHKDADLYKTIYCPLSHPTNLEHILKVA
KSTVAAIEYINLKHNELCILDAIKCLDSNSLKYLDLRYNSLLNMKDLEILQNLMIRKLWL
DGNPLCENYSSAKQYINSAMIYCPHIIQLDGAAVYNSTFPITHYEYFKNGSRRELVYQFI
RHYFNLFDQEDRKILRGLYDKHALYSLSCNIPFSIAHKKNLVQYTKSRNLLKVTNSNKRR
KFLYYGETDILNTINALPRTCHYQNSFQYDLMYDDNERLMICVTGLFMNKNSNNQILSFN
RTFVLWTGPDNEYTIINDQSCINDTPENETLINTIIALNDTDSTSHDKDFVPECFSPKER
YELITELEQISKLKKEWCQTYLYKTHWNLRQSIQTFMRDFKNNTLPPEAFNI
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagaaatttgggaattccgcatagttacactttagattcatcaatggcaattaaa
ttggtcataggtcagaacaacaattatccagaacaaatgctaatagaaagtctaaatata
tggcatgagtttaaaataattagaggtgcacagtacaacaaggaagacgtattaaaagct
atattaaattctgtagaaccggcatacttgttaccagtgaaatatcaagtgcgaggagaa
gattcatattttatagccagcaattgtggccctgctattgaaagcttatgcagatctagt
ttaattgttaaaaatccacacggtaatcctctgattttaacaattgtcttgggctttgcc
tcggtttctgatttaaccattaacattcaaccgcttattttaaatactttgacaaaaagg
tatgattttaataagaaattattagatttagaagcatttcataaggatgcagatttatat
aaaactatttactgtcctttgtcgcatccaactaatttggaacacatattaaaagttgct
aaaagtacggtggctgcaattgaatatataaatttaaagcataatgaattatgtatattg
gacgctataaaatgtttagactcaaattctttgaaatatttagatttaagatacaatagt
ttattaaatatgaaagatcttgagatcttacaaaatttaatgattaggaaactttggtta
gatggtaatccactatgtgaaaattattctagtgctaaacaatatataaactctgcgatg
atatattgcccgcatataattcagttggacggtgcagctgtatataattctacttttcca
ataacgcattatgagtacttcaagaatggttcaagacgtgaacttgtatatcaattcatt
agacattattttaatttatttgatcaagaagatagaaagattttaagaggattgtatgat
aaacacgcactttactctttaagttgcaatattccattttctattgctcataagaaaaat
ttagtgcaatatactaaaagtagaaatcttttaaaagtaacaaattcaaataaaaggcgt
aaatttttatactatggagaaactgatatattgaatactatcaacgcattaccaagaact
tgtcattaccaaaactcatttcaatatgatctgatgtacgatgataatgaacgtttaatg
atatgtgttaccggattatttatgaataaaaatagcaataatcaaatactatcgttcaat
agaacttttgttttatggactggtcctgataacgaatatactattataaatgatcagtca
tgcattaacgatactccagaaaacgaaactttaattaatacaattattgcattaaatgat
acagatagtacttcacatgacaaggattttgtaccagaatgttttagcccaaaagagaga
tatgaactaataacagaattagaacaaataagtaaattaaagaaagagtggtgtcaaacg
tatttgtataagacacactggaatttgcgacaaagtattcaaacttttatgagagatttt
aaaaacaacactctaccgccagaagcttttaatatttaa
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