Polistes canadensis: 106791226
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Entry
106791226 CDS
T05611
Name
(RefSeq) DEAD-box helicase Dbp80
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pcf
Polistes canadensis
Pathway
pcf03013
Nucleocytoplasmic transport
pcf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106791226
03015 mRNA surveillance pathway
106791226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcf03019
]
106791226
Enzymes [BR:
pcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106791226
Messenger RNA biogenesis [BR:
pcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106791226
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
106791226
NCBI-ProteinID:
XP_014612210
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MASAKVDWGKFAEEQDELASKVTDINLDQKSKETLTSSNEDSKSDDGADEQISPAEKSLL
QKIIRKGLVETTKGIEVQRKDPSSPLYSVKSFEALSLKPALLKGVYAMGFNAPSKIQETA
LPALLADPPHNMIAQSQSGTGKTAAFVLAMLSRVDTTKDYPQVLALSPTYELAIQTGEVA
AKMSRFCPEIKLKYAVRGEEIPRGTKITDHIIIGTPGKVLDWAVKFKAFNLSKISVFVLD
EADVMIATQGHQDQCIRIHKLLPRTCQMMFFSATYESAVMSFAEIIVSNPLIIRLMKEEE
SLDNIKQYYVKCKDKDGKYAAITNIYGVITIGQAIIFCHTKKTASWLAEKMTKDGHAVAL
LTGELTVEQRISVLDRFRAGLEKVLITTNVLARGIDVEQVTIVVNFDLPMDQDRQADCET
YLHRIGRTGRFGKSGIAINLIDSSHAMQLCNDIEKHFGKKIHYLDADDADEIEKIGA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgccaaagttgattgggggaaatttgctgaggaacaagatgaattagcttct
aaggtaacagatattaatctagatcaaaagtcaaaagaaacattaacgagttcgaacgag
gattctaagagcgacgatggtgcagacgaacagatttcaccggcagaaaagtctttatta
caaaaaattatacgaaaaggattggtggaaacgactaaaggtatagaggtgcagaggaag
gatccgtcatctccattatatagcgttaaatcttttgaagcgcttagtcttaaacctgca
ttattgaaaggagtttatgcgatgggttttaatgcaccatcaaagattcaagaaacagcg
ctaccagctttgcttgccgatccgcctcataatatgattgcacaatcccaatctggaact
ggcaaaactgcggcatttgtactagctatgttaagtagagtagatacaactaaggattat
ccgcaagtgcttgctttatcgccaacatatgaattagcaatacaaactggagaagttgct
gctaaaatgtctcgtttttgtcctgaaattaagttgaaatatgccgttagaggggaagaa
attcctcgtggcacaaaaatcacagatcacatcattattggtacaccaggaaaagtttta
gattgggcagtgaaatttaaagcctttaatttaagcaaaatctcagtttttgttctggat
gaagctgatgtaatgatagcaacacaaggccatcaagaccaatgtattcgtattcacaaa
ttacttccacgcacatgccagatgatgtttttttcagcaacatatgagagtgcagtaatg
tcgtttgctgaaatcatagttagcaatcctcttataataagattgatgaaagaagaagaa
agtttagataatattaaacaatattacgttaaatgcaaagacaaagatggcaaatatgca
gctattacgaatatttatggtgttataactattggtcaagctattattttttgtcacacc
aaaaaaacagctagttggttagcagaaaaaatgacaaaagatggtcatgcagtagcttta
ttaacaggagaattaaccgtagaacaaagaatttctgtattggatagatttagagctggc
ctggaaaaagttcttattacaacgaacgtattagcaagaggtatcgacgtggagcaagta
actatagttgtgaattttgatctaccaatggatcaagatcgtcaagctgattgtgaaaca
tatttacatagaattggtagaacggggcgtttcggaaaatctggaatcgctattaattta
atagactcatcccacgcaatgcagttatgcaacgacatagaaaaacattttggaaagaag
atacattacctcgatgcagatgatgcggatgaaatagaaaagattggtgcttaa
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