Polistes canadensis: 106791252
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Entry
106791252 CDS
T05611
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pcf
Polistes canadensis
Pathway
pcf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106791252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcf03021
]
106791252
Enzymes [BR:
pcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106791252
Transcription machinery [BR:
pcf03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
106791252
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
106791252
NCBI-ProteinID:
XP_014612250
LinkDB
All DBs
Position
Unknown
AA seq
1699 aa
AA seq
DB search
MQKYQEKRLTPKHLDPKCLTFSVFTTEDIEKLSVMKIRTPLSFNILGHPLKGGLYDPALG
PLLESSDPCATCGSTVYKCPGHFGHIELPMPTVNPLFHKALFLLIKLSCLNCFTLQIPTH
IKMLLCAKLKILEMGLLSDIDSLEEEINSVTSKSQDIPESDLVYIQDIIETYIRNLINKT
KYIPNAQSNRTVLNTKNINAQRHMYIDSILKKYTVGKICINCQEAIPKITVLKNKIMTTK
TSDANFTSTNMMSSMVVHKLETVIIMPDQSKEYLRKLWQNEEDFIKIIIPCLNNVKAEYA
TDVFFYDVIPVLPPIVRPINFLHGQMIEHPQSQVYKSIIQDCLILRNIIQYIQNGNTNQL
PEEGKMVFDQIKGSTAVEKLHYAWQMLQTNVDHLMDRELNRTPDSANCLGLKQVIEKKEG
IIRMHMMGKRVNYAARTVITPDPNLDIDEIGVPEIFALKLTYPIPVTPWNVLELRKLVLN
GPNVHPGAVIIENEDGSVQRLSPIDATKREAVAKRLLPSSDKANRFFKGIKVVHRHLQNG
DILLINRQPTLHKSSIMAHKARILKGEKTLRLHYANCKSFNADFDGDEMNAHYPQNELAR
SEGYFIANVSNQYLVPKDGTPLSGLIQDHVISGVRLTMRGQFFNRTDYMQLVYCGLVGHK
GDLKLLPPSILKPIPLWSGKQIISTVLINIIPPNTARINLNSTAKINVKQWQTNKARQWK
CGTEFTSPEQMSEAEVIIRNGELLCGVLDKMHYGATPYGLVHCVYELYGGSYSSKLLSAF
GKLFQAFLQREGFTLGIEDILVVPKADMKRKEIISESRTLGEDIQKSLLEMPADTPSDVL
SSKIEESYWAEPKFRTQVDRKYKHVLDVYTNNINKTCLPAGLLKKFPHNNLQLMVQSGAK
GSMVNTMQISCLLGQIELEGKRPPLMISGKSLPSFPAYDPTPRAGGFIDGRFMTGIRPQE
FFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLVVNYDSTVRDSDGSLIQIYYGEDG
LDVPASTFLKKNQMDFLVDNKNVIVDPNLVRNLKQDSNYESTLKSVKKIKKWSKKHGNSL
NTKRRNEFFIFSGENYNPNSSKSKRIDGNSGRSKGTLSLLRKWIRMDEETKKSYKKQCVR
CPDPLISKFRQDTEFGVLSERLESLMDEYMSNKSSGSNGKIEKNELRDLLWMKVMKSVCP
PGEPVGLLAAQSIGEPSTQMTLNTFHHSGRSEMNVTLGIPRLREILMMASKVIKTPSMEI
PFKRDLHNLSKQSNKLRQKLTKCILTDVLESIRIDREMEQLPHRRLVHTLHIEFLPHKYY
KSEFCVNPKSIIDKTEQMFFKALFKEIKKTKLTGNLIHVEEEKKQGNNEDALLDEDEPED
EPKEPKATVKRDFGEQHESSDEEEVAEDADATVRRTMSRHQENQEYEEDTEDEVENGNEK
DDDNDFVEMKPDETRNEDSKVEEREEDDESLEYQNSDAKDTQKRRQNVLKTYLYALEYEY
DQVKSLWCTFKFWLPLRMIKIDLPTIIRKAASKVTLWETPNIRKAFTIEGSDGETILKTD
GLNIIEMFKYNEILDLSRLYSNDIYGISQTYGIEAANKVIIREVKDVFKMYGITVDFRHL
SLIADYMTFDGSFKPLSRKGMDDSASPFQQMSFESSLNFLRNATLQGKKDDLNSPSSRLM
LGQPCKSGTGAFSLLAKIH
NT seq
5100 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaatatcaggaaaaacgtttgactccaaaacacttggatccaaaatgtttaaca
ttttcagtttttacaacagaagatatagaaaagttgagtgttatgaaaattagaactcct
ctgtcattcaatatattgggccacccgttgaaaggtggtttatatgatccagcactagga
cctttgcttgaaagttcagatccttgtgcaacatgtggttctacggtatacaaatgtcct
ggtcattttggtcatatagaattaccaatgcccactgttaatccattattccataaagca
ttatttttgttgattaagttatcttgtctgaactgttttactttacaaatcccaacgcat
ataaagatgttgctatgcgcaaaactaaagatcctagaaatgggcttactcagcgacata
gatagtttggaagaagaaataaattctgttacatcaaagtcacaagatatacctgaatcc
gatctggtatatattcaagatataatagaaacttatatacgcaatctcattaataaaaca
aaatatatacccaacgctcaatccaacagaactgtgctgaatacaaaaaatattaatgct
cagcggcatatgtacattgatagcatactaaaaaaatacaccgttggaaaaatttgcatc
aactgtcaggaagctatacctaaaataacagttttaaaaaataaaattatgaccactaaa
accagcgatgccaattttacatcaacaaatatgatgtcgagtatggtagttcataaattg
gaaactgtcattataatgcccgatcagtcaaaagaatacttgagaaagttatggcaaaat
gaggaagattttattaaaataattattccttgtttaaataacgtcaaagcagagtatgcg
acagatgtatttttttatgatgtcataccggttttgccacccatagtaagacccataaac
tttcttcatggacaaatgatcgaacatcctcagagtcaagtatacaaaagtatcatacaa
gactgtcttattcttcggaatatcatacagtatattcaaaatggtaacactaatcaactt
ccagaagaaggaaaaatggtttttgatcaaataaaaggtagtacggctgtagaaaagcta
cactatgcgtggcaaatgttacaaacaaatgtagatcacttaatggatagagaattaaat
agaactccagattccgcaaattgtcttggactgaaacaagttattgaaaaaaaggaaggt
atcataagaatgcacatgatggggaaaagagttaactacgcggcacgtaccgttattaca
cccgacccaaacttagatatcgatgaaatcggtgttccggaaatttttgcacttaaattg
acttatcctattcccgtaacaccctggaatgtattggaattgcgaaagttggttttaaat
ggaccaaatgttcatccaggagcagttataatagaaaacgaagatggatctgttcaacgc
cttagtcctatcgacgcaactaaaagagaagctgtcgcaaaacgtcttttgccgagcagc
gataaagctaatcggttttttaagggtattaaagtcgttcatagacatcttcaaaatggt
gatatacttttgatcaatcgccaaccaacattacataaatctagtataatggctcacaag
gcacgcattttaaaaggggaaaaaacgttgcgtcttcattacgctaattgtaaaagtttt
aatgcagattttgatggcgacgaaatgaatgcgcattatccacaaaatgaactcgcaaga
agcgaagggtactttatcgcaaatgtatctaatcaatatcttgtaccaaaagatggtact
cctttgagtgggcttatacaagatcacgtaatttctggggttcgtttaacgatgagaggt
cagttctttaatcgaaccgattacatgcaattagtttattgcggattggtgggacataaa
ggagatttgaaattgttaccacctagcattttgaaacctatcccattatggtcaggaaag
caaataatatcaactgttcttattaatattattcccccgaatactgcaaggattaattta
aattccacagcaaagattaatgttaaacaatggcaaactaataaagctcgccagtggaaa
tgcggtaccgaatttacaagtcctgaacaaatgtcagaagcagaagttattataaggaat
ggcgaacttttatgtggcgtacttgacaaaatgcattatggtgcaacaccatatggtctg
gtacattgcgtttacgaattatacggaggatcgtattctagtaaattgctaagcgcattt
ggcaaacttttccaagcatttttacaacgagaaggttttactcttggtatagaagatatt
ttagtcgtaccaaaagcagatatgaaacgtaaagaaattatctcggaaagtagaacgttg
ggagaagatatacaaaagagtctattggaaatgccggctgatacgccttcggacgtatta
tcgtctaaaatagaagaatcttattgggctgagcctaaatttcgtactcaagtcgaccga
aaatataagcatgtattagacgtctacactaataatattaacaaaacgtgcctaccagca
gggcttttgaaaaagtttccccacaataatttacaattaatggtacaatccggagccaaa
ggatctatggtaaatactatgcaaatttcgtgtttgctcgggcaaatagaactggaaggt
aaaagaccgccgttaatgataagtggaaaaagtttaccaagttttcctgcctatgatcca
acaccaagagcaggaggattcattgatggccgttttatgacagggatacgtccacaagag
tttttttttcattgtatggccggtagagaaggcttgatcgatactgcagtcaagactagc
agatctgggtatctgcaaagatgtcttataaagcatttagaaggtttagttgtcaattat
gattctaccgttagagattccgatggtagcttgattcaaatttattatggcgaggatggt
ctcgacgtaccagcctcaacgtttttaaaaaaaaatcaaatggacttcttagtagataat
aaaaacgttattgtcgatccaaatctggtaagaaatttaaaacaagattccaattatgaa
tctactttaaagtctgtaaagaaaattaaaaaatggtcaaaaaagcatggcaattcgttg
aacacaaagagaagaaatgaatttttcatattttccggagaaaactataatcctaatagc
tcgaaatcgaaacgtatcgatggaaatagtggaagaagtaaaggaactctgtcgttgtta
agaaaatggataaggatggacgaagaaacgaaaaaatcatataaaaagcagtgcgtcaga
tgtccagaccctttaatttccaaattcagacaagatacagaatttggggtactttcggaa
agattggaaagcttaatggacgaatatatgtcgaataaatcttctggatctaacggaaaa
atcgaaaagaacgaattgagagatcttttgtggatgaaagtaatgaaatctgtatgccca
ccgggtgaaccagttggcttgctagcggcacaatccataggagaaccatccactcaaatg
acgctaaatacatttcaccattcaggacgtagtgaaatgaatgttaccttgggtattccg
cgattacgtgaaattttgatgatggcttcgaaagttatcaaaactccctctatggaaatt
cctttcaaaagggatttgcacaatctcagcaaacagtctaataaattacgtcaaaaattg
acgaaatgtatattgactgatgttttggaaagtattagaattgacagagaaatggaacag
ttaccgcatagacgactcgttcatacgttacacattgaatttctacctcataaatattac
aaaagcgaattttgcgttaatccaaaaagtattattgacaaaaccgaacaaatgtttttt
aaagcattgtttaaagaaataaaaaagactaaattaactggtaatctaatacacgtcgaa
gaagaaaagaaacaaggaaacaacgaagatgctttattagacgaagatgagcctgaagat
gagccaaaggaacctaaggcaactgttaagagagattttggagaacaacacgaatcgtcc
gacgaggaagaagttgcggaagatgcagatgctacggtcagacgaacgatgtcccgacac
caagaaaatcaagagtatgaggaagatacggaagatgaagtagaaaatggtaatgaaaaa
gatgacgataatgatttcgtagaaatgaaacccgatgaaacgaggaacgaagatagcaag
gtggaagaacgagaagaagatgacgagagtttagaatatcaaaatagtgatgcgaaagat
acacaaaagagacgtcaaaatgtattgaaaacgtatttgtatgcactggaatacgaatac
gaccaagtcaaatcgctatggtgcacattcaaattttggttgccacttaggatgatcaag
atagatctgccgacaattattagaaaagcagcaagtaaagtcactctctgggaaactcct
aatataaggaaagcatttactattgaaggttccgatggagaaactattcttaaaactgat
ggattaaatataatagaaatgttcaagtacaatgaaattttagatttatctagattatat
tctaacgacatttacggaatttcgcaaacttatggcatcgaagctgctaataaagtaata
ataagagaagttaaagatgtatttaaaatgtatggaataacggtagactttagacatttg
tctctaattgccgattacatgacgtttgatggttcatttaaacctcttagtcgcaaagga
atggacgattctgcctctccttttcaacaaatgagtttcgaaagttctctaaactttttg
cgaaatgctacgttgcaaggaaaaaaagatgatttaaattcgccatccagtcgattgatg
cttggacaaccatgtaagtcgggtacaggtgcattttctttattagcaaaaatacattaa
DBGET
integrated database retrieval system
