Polistes canadensis: 106791359
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Entry
106791359 CDS
T05611
Name
(RefSeq) probable nucleoporin Nup54
KO
K14308
nuclear pore complex protein Nup54
Organism
pcf
Polistes canadensis
Pathway
pcf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106791359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcf03019
]
106791359
Messenger RNA biogenesis [BR:
pcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106791359
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
106791359
NCBI-ProteinID:
XP_014612423
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MSFGTGFGANTSAPASSFSFGSTATAAPTPIKLGFGTPAFGFNTPTTSASNLFGTPSTQT
TAFGTGTGFGTPAATGFGTIPSTGFGTTPAFGTPATSGFGTGSTFGTTSATTTGFGTPST
FGSTPVPSTGFGVFGTTTTTASLGFGGFSGFGTTTTTSAPSLFSGYGTASTAPSTSFSSS
IGGFGSFGQKPTTTTAITGFGTQTTGSIFGSTGFTGFGTGIQTQQQQQQIQQQQQSISEA
LYNAVFNCQLYNDERDNTIARWNLIQALWGTGKAYYSVNAPPIDLNQENPLCRFKAIGYS
RIPDADNNDGLVVISFGKKEKMVTEGKQQLIAFLHGILGNKPNLTVMVDSIKSTGKNKCQ
VSIFISEKGVTGSSRKIPANELVAYLSQPMQKQQLVQNGVKDVFPFVKLDPTQLKEYLDN
PPCSIDPRLWKQAQLDNPNPEMYIPVPMIGFQQVKYRLKCQKEETARHRAFLDMAAERIQ
DLQRQHTAMQAKLKEHRRILLELQHRVLQVLVRQEITRKVGLSLQPEEETLTRRFETMHS
QISAPTQFKGRISEMLSQLRMRRHIDSQNQERYTMDPIAQDDIKTYLSMEQQGMAQLIDT
INADLVSLKIIKDGMSDLLLSHSIP
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttggaactggatttggagccaacacatcggcaccagcttcatcatttagtttt
ggttcgacagctactgcagctcccacaccaattaagctgggatttgggactccagctttt
ggattcaatacaccaacaacttcggcttctaatctttttggcactccgtcgactcaaact
actgcatttggaacaggaacaggatttggaacaccagcagctacaggctttggtactata
ccaagcactggatttggaacaactcctgcatttggcactccagctaccagtggttttggt
actggatcaacttttggtaccacttcagcaacaactactggatttgggactccttcgacg
tttggcagtacccctgttccttcaactggttttggtgtatttggtacaacgacaactaca
gcatcattaggatttggtggatttagtggatttgggaccacgaccacaacttctgcgcca
agtttatttagtggttacggtacagcgagtacagctccatcgacaagtttttcctcatct
attggcggttttggtagcttcggtcaaaaacctacaacaacaactgctatcacaggtttt
ggcacgcaaacaacaggtagtatttttggttctactggttttactggatttggaactggg
atacaaacgcaacaacagcaacaacaaatacaacagcagcaacagtctatttctgaagca
ctttataacgccgtgtttaattgtcagctttataatgacgaacgagataatacgattgct
agatggaatctcattcaagcattgtggggtactggaaaggcttattattcggtaaatgcg
ccgccaatcgatttgaatcaagaaaatccattatgcaggtttaaggccatcggctatagc
cgtattcccgatgctgataataacgatggattggttgtaatttcttttggtaagaaagaa
aagatggtaacggaagggaaacaacaattaattgcattcttacatggtattcttggaaat
aaacctaacttaacagtgatggttgatagtataaagtcaacaggaaaaaataaatgtcaa
gtgtctatttttatttctgagaaaggagtaactggaagttcaagaaaaattcctgctaat
gaattagttgcttatctttctcagcctatgcaaaaacaacaacttgtgcaaaatggtgta
aaggacgtatttccgtttgttaaattggatcctactcaattgaaagaatatttagataat
ccaccttgttcgattgatccacgattgtggaaacaggctcaattggacaatccaaatcca
gagatgtatattcctgtaccaatgataggttttcagcaagtgaaatatagactgaaatgt
cagaaagaagagaccgctaggcatagagcttttctagatatggctgcagaaagaattcaa
gatttacagaggcagcatactgccatgcaagcaaaattaaaagagcataggagaatattg
ttagaactacagcatagggtattacaggtattggtacgtcaggaaattactcgcaaagtt
ggtttgtcgttacaaccagaggaggaaactttgactcgtagatttgaaactatgcattca
cagataagtgcacctacacaatttaaaggaagaatcagcgaaatgttatctcagcttaga
atgagacgacatatagatagtcaaaatcaagaaaggtatacgatggatccgatagcacaa
gatgatataaaaacgtatttaagtatggagcaacaggggatggctcaactaatcgataca
ataaatgccgatttggtaagtttaaaaataattaaggatggtatgtcagatcttttattg
agtcacagtataccctga
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