Polistes canadensis: 106791477
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Entry
106791477 CDS
T05611
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
pcf
Polistes canadensis
Pathway
pcf04382
Cornified envelope formation
pcf04512
ECM-receptor interaction
pcf04518
Integrin signaling
pcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106791477
04518 Integrin signaling
106791477
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106791477
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106791477
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcf04147
]
106791477
00536 Glycosaminoglycan binding proteins [BR:
pcf00536
]
106791477
Exosome [BR:
pcf04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106791477
Glycosaminoglycan binding proteins [BR:
pcf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106791477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106791477
NCBI-ProteinID:
XP_014612608
LinkDB
All DBs
Position
Unknown
AA seq
1976 aa
AA seq
DB search
MTRLGLRLVASLVCLTGIVSGENNITWNRNVQPVVPLNQARGDIGKPKGTDDDDNVKWGH
LVQHFKHPDTSIDIDNWNSSDGLGNDYRDENNKNRHGLIPGESYGSRHSNNSNQYPYNSG
YPESGRRQDGEESSGSSGNLDNQYNNYPSGQREPSYSYSHSQGQYPGNNARNSYNINRAP
VDPYGRDSSSSSGQESGYNIGYNPSGYNPSYNPGGYNPGGYNTGYNRGQGGYGAAGESEN
YPSSYSVVTVPGATRSRNCTGSANCVPKCFAEKGSRGPPGTVGPQGPKGQQGFPGSEGLL
GPKGEKGDPGPQGPRGSKGDRGKMGMPGFPGINGIPGVQGPPGASGLPGRDGCNGTDGAP
GKDGQPGEIGPRGFRGTPGPKGEKGQPAFAGNFPVGQKGEPGIDGVRGPPGPPGLQGQRG
YAGPKGERGPQGIPGIPGLKGEKGNMGLGFEGLKGDKGQKGEQGPPGSTGPFVPLTTSGT
EMAGPPGESGEKGDKGEMGFDGLKGEPGMIGDHGLSGAAGMKGEKGLPGAPGIRGRDGFS
GPPGPPGRKGDRGYDGLDGLPGRPGQKGEPGKDGPMGVSGLRGPPGPPGGGKGRPGPPGP
KGPRGFPGPIGPRGSDGFPGDPGPKGPIGLQGGPGLQGIPGPEGMPGEKGGKGEPGLTGF
PGGDGRRGFDGPPGPVGPRGLPGEKGLSIMGPKGMDGTPGRDGEKGQKGERGYVGVRGRP
GDSLDGIPGSPGAPGLTGEPGTPGRDGAPGFPGSPGEKGDIGGRCQDCIPGSRGPKGDRG
FDGNPGLPGSRGPPGERGFPGEPGLDGLPGLMGPSGPPGRDGIPGSPGPQGSPGAPGIVT
KDMLKLEKGDKGLRGETGRPGPPGPEGPPGEKGRPGLEGFPGLKGQPGDRGFPGQDGTPG
RSGTPGRKGEKGTSLKGEPGEAGRPGAPGAKGEPGFYGEKGEPGMCQPLNWVDRLKGSRG
PPGDKGEPGPPGADGLPGDKGLQGLQGPPGNAGPSGATGPVGPRGLPGPRGDKGNTGPMG
FPGEPGREGLRGYPGFHGAKGDKGESGISVKGSPGLPGPPGLKGEKGLPGPPGKEGQFGS
PGLTGFTGEKGDIGVPGNNGLPGIPGEKGDNGPIGPPGPPGAAGTPGADGSKGEPGLLGE
PGRPGLPGFPGTKGDRGVPGIDGPKGYPGRRGLPGTPGRSGSEGLPGLKGERGEKGSAGF
PGLPGMEGKPGRPGLSGEKGDIGPEGLPGVPGLPGYEGPKGDTGPAGLPGRKGEPGQVSE
KGQKGEPGMPGIRGPPGPSGKDGYDGLKGEPGRPGVGRDGLPGLKGEAGQPGRDGLPGFQ
GPKGDAGVRGFIGLKGDVGLPGKPGEPGPPGMDGFPGEVGEVGPPGAPGFPGAEGKMGAP
GRPGLDGVKGDRGLPGPAGIAGIPGSPGEKGDKGPQGPTIQIKGEKGEPGHPGLTGLPGA
KGDRGLEGMVGYDGEKGDRGPPGPVGSPGQPGAVGLKGDQGPSGSPGLPGITIKGEKGLP
GLMGKHGRDGFSGLPGEKGEQGLPGLPGPKGDAGPYGPIGPQGEKGDEGPAGLSGPPGRD
GAPGLEGVPGLPGDRGLKGDRGPPGLFGAPGQKGEPGQPGQNGLDGLPGEKGDTGWDGAT
GLPGIVGEKGDRGYPGAIGLMGAVGYVGDKGEKGDDCIEPPLGPKGDRGYPGPAGLPGQP
GEKGLPGPPGFPGMNGAKGAQGFMGPPGPKGLTGLAGPPGSPGLPGLEGAIGAPGPAGEP
GQPCETAPDYLTGILLVRHSQSEYVPKCDSGHIKLWEGYSLLFTDGDERAHSQDLGSAGS
CVRKFSTMPFIVCDINDVCNYASRNDRSYWLSTNKAIPMMPIEELAIEEYISRCVVCEVP
TNVITIHSQSQEFLTCPNGWTSLWIGYSFIMHTGAGAQGGGQSLSGSGSCLEDFRAVPFI
ECNGAKGQCHYYSNEFSFWMSTIEDSQQFRAPKQETLKAGNLKSRISRCQVCIKNT
NT seq
5931 nt
NT seq
+upstream
nt +downstream
nt
atgacccggttgggattgcgactcgtcgcatccctagtctgcttgaccgggatcgtcagc
ggggaaaataatattacatggaataggaacgtgcaaccggtcgttcctttgaatcaagcg
cgaggcgacattggaaaaccaaaaggcaccgatgacgatgataacgtaaagtggggacac
ttagttcagcatttcaagcatccagatacaagtattgacatcgataattggaattcgagc
gacggcctcgggaacgattaccgagatgaaaataataaaaatcgacatggattgatacct
ggtgaatcttatggatcaagacattcaaataattcgaatcaatacccatataattcaggg
taccccgagtctgggagacgacaggatggcgaagaatcatctggatcatctggaaatctc
gacaatcaatataacaactatccttctggacaaagagaacctagttattcttattctcat
agtcaaggccaatatccaggaaataatgcaagaaactcttataatattaatcgtgctccc
gttgatccttacggtcgagactcttcttcttcttctggtcaggaatctgggtacaatatt
ggttacaatcctagcggttacaatcctagttacaatcctggcggttacaatcctggcggt
tacaatactggttacaatagaggacaaggtggatatggagcagctggagaatcggaaaat
tatccaagcagttactcggttgttactgtacctggtgcaactcgatcccgtaattgcact
ggctcggctaattgcgtaccaaaatgcttcgctgagaaaggttcacggggaccacccggt
acggttggaccacaagggccaaaaggacaacaaggatttcctggatcggaaggtctttta
ggtccgaaaggagaaaagggtgatcctggtccgcaaggaccacgtggatcaaaaggagat
aggggtaaaatgggtatgcctggttttcctggaataaatggtattcctggagttcaaggc
ccacccggcgcttctggacttcctggtagagatggttgtaatggaacagacggtgctcca
ggtaaagatggtcaacccggtgaaatagggccgcgaggttttcgtggtactccaggtccg
aaaggagaaaagggtcaaccagcttttgcaggaaattttccagttggtcagaaaggagag
cctggaatagatggtgtacgaggccccccagggcctccaggattgcaaggacaacgaggt
tatgccggtccgaaaggagaacggggaccacagggtatacctggtatcccaggattgaaa
ggagaaaaaggtaatatgggtcttggatttgaaggattaaaaggagataagggacagaag
ggagagcaaggtcctcctggttcgacaggaccgttcgtcccattgactacatcaggaaca
gaaatggctggaccacctggtgaatcaggagaaaaaggagataaaggtgaaatgggattc
gatggtctaaaaggagaaccaggaatgataggagatcatggtctctccggtgcagccggc
atgaaaggagaaaagggtcttcctggagcgccaggtattcgaggtagggacggtttttct
ggacctcctggaccacctggtcgtaaaggtgatcgaggttatgacggattggatggtctt
cctggtcgtccgggacaaaaaggagaacctggtaaggatggacctatgggcgtttcagga
ctgagaggaccacctggtccaccaggtggtggcaagggaaggccagggccaccaggtccc
aaaggtccacgaggatttcctggacctattggtcctcgaggttccgatggattcccaggc
gatcctggtccaaaaggtcctatcggtttacaaggtgggcctggtttgcaaggaattcca
ggtccggaaggcatgccaggagagaaaggaggaaaaggagagccaggacttactggattt
cctggtggtgatggtcgtcgtggtttcgacggtcctccgggaccagtaggtccacgaggt
ctacctggggaaaaaggattatcgattatgggccctaaaggaatggatggtacacctggt
cgagatggagaaaaaggacaaaaaggagaacgcggatatgttggagtacgaggtcgacca
ggagattctttggatggaattccgggttcaccgggagcacctggattaaccggagagcct
ggtacaccaggaagagatggtgcacctggttttcccggatcacccggtgaaaaaggagat
atcggtggccgttgtcaagattgcataccaggttcacgaggaccgaaaggagatcgggga
ttcgatggtaaccctggcttgccaggttcgcgtggtccgcccggggaacgtggatttcca
ggagaaccggggctggatggattgccaggacttatggggccatcaggaccaccgggaaga
gatggcattccaggttcccctgggcctcaaggatctccgggagcgccaggcatagttact
aaagacatgttaaaattagaaaaaggtgataaaggattgcgaggagaaacgggtcggcca
ggacctccaggaccagaaggaccaccaggagaaaagggtagaccaggattggaaggtttc
ccaggactgaaaggacagccgggagatcgtggatttccgggacaagatggtacgcctggt
agatcaggaacacctggacgcaaaggtgaaaaaggaactagtttgaagggagaacctgga
gaggcaggaaggcctggagctcctggagcgaagggtgaacctggattttacggtgaaaag
ggtgaacctggaatgtgtcaacctttaaattgggtggatagattgaaaggtagtagaggt
cctccaggagacaaaggtgaaccaggacctcctggcgcagatgggctaccaggtgacaaa
ggtttacaaggacttcagggtcccccaggaaatgctggaccaagtggtgcaactggtcct
gtcggaccacgtggtttacctggtcctagaggagataaaggaaacacagggccaatgggt
ttccctggcgaacctggtcgtgagggacttagagggtatccaggtttccacggtgcaaaa
ggcgataaaggagaatcaggaatatctgtaaaaggtagtcctggtttacccgggccacca
ggattaaaaggagaaaaaggtcttcctggtccaccaggaaaggaaggacaatttggatcg
ccaggactaacaggatttactggtgaaaaaggagatatcggcgttccaggaaataatgga
ttgccgggtataccaggagagaaaggagataacggaccaattggaccaccagggcctcct
ggtgccgctggaacgccaggagctgacggcagtaaaggtgaaccaggattattaggagaa
ccgggtagaccaggacttccaggattccctggtacaaaaggggatcgtggagttcctggt
attgatggacccaaaggatatcctggacgacgtggattgcctggtacacctggtagatct
ggaagcgaaggtttgcccggtttgaaaggagaaaggggtgagaaaggatctgcaggtttc
ccaggcttacctggtatggaaggaaagcctggtcgacctggtttatcaggcgaaaaagga
gatattggtccagaaggtcttcctggtgtgccgggattacccgggtatgagggaccaaaa
ggtgatacaggaccagcagggttacctggccgaaaaggagagccagggcaagtatcggaa
aaaggacagaagggtgaacctggaatgcctggcattcgtggacctcctggaccatcagga
aaggatggatatgatggtctgaaaggtgagcctggaagaccaggtgtaggacgagacggt
ttacctggtttaaagggagaagcagggcaaccaggacgcgatggattaccaggatttcaa
ggtccgaaaggtgacgctggcgtacgaggattcattggcttaaaaggggatgtgggtcta
cccggaaaaccaggagaaccaggtccacctggtatggatggtttcccaggtgaagttgga
gaagtcggacctcccggagcacctggtttccctggagctgagggaaaaatgggtgcacca
ggacggcctggacttgatggcgttaaaggcgatcgcggtcttccaggtcctgctggtatt
gctggcattcctggatcacccggtgagaaaggagacaagggaccacaaggaccaacgatt
caaatcaaaggagaaaagggtgaacctggtcatcctggtttaactggactacctggcgct
aaaggtgatcgtggtttggaaggtatggttggatacgatggagagaaaggagatagaggt
ccgcctggtccggtaggaagtcctggccagcctggagcggtaggccttaaaggtgatcaa
ggtccgtctggttctcctggtctacctggaataacaattaagggcgagaaaggtttacca
ggtttgatgggtaagcatggacgagacggtttctcaggtcttccaggagaaaaaggagaa
caaggacttcctggattgcctggaccaaaaggagatgccggtccttatggtcctattgga
ccgcaaggagaaaaaggtgacgaaggtcctgccggtcttagcggtccacctggacgcgat
ggcgcgccaggtctcgaaggagtaccaggtctgccaggtgatagaggtctaaagggagac
agaggaccaccaggacttttcggtgctccaggacagaaaggagagcctggccaaccaggt
caaaatggtttggatggtcttcctggagaaaagggtgataccggttgggacggagcaact
ggacttcctggaatagttggtgaaaagggagatcgaggatatcctggtgcaattggtttg
atgggtgccgttggatacgttggtgataaaggtgaaaaaggtgacgattgtatcgaacct
ccactaggaccgaagggtgatcgcggttatccaggtcctgctggattacctggacaacca
ggcgaaaaaggtcttccaggaccacctggtttcccaggaatgaacggtgcaaaaggagct
caaggattcatgggacctcctggtccaaaaggattgacaggtcttgccggtccacctggt
tcgcccggtttgccaggtctcgaaggtgctattggagctcctgggcctgctggagaacca
ggtcaaccatgcgaaactgcacccgattatctcaccggcattttactagtccgacatagt
cagagtgaatatgtacctaaatgtgattcaggtcacatcaaactatgggaaggatatagt
ttattattcacggacggcgacgagagagctcattctcaggatctaggtagcgctggctcg
tgcgtaagaaaattctcgacaatgcccttcatagtttgcgatatcaacgatgtttgcaat
tacgctagtcgcaatgatcgttcttattggttatcaacgaataaagcaattcctatgatg
ccaatcgaggaattggcgatagaggaatacatctccaggtgcgtagtatgcgaagttcca
acaaatgttataacgatacacagtcagtcccaagaatttctgacttgtccaaatggatgg
actagcctttggattggatacagtttcataatgcacactggcgcaggtgctcagggtggt
ggacaatcattgtccggttctggttcgtgcttggaagatttccgggcggttcctttcatc
gagtgcaatggcgcgaaaggtcaatgccattattattcgaacgagtttagtttttggatg
tctaccatagaagatagtcaacaattccgtgcgcccaaacaagagaccttaaaggcagga
aaccttaagtcgagaataagtcgctgccaagtttgtataaagaatacgtaa
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integrated database retrieval system