Polistes canadensis: 106791558
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Entry
106791558 CDS
T05611
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
pcf
Polistes canadensis
Pathway
pcf03013
Nucleocytoplasmic transport
pcf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106791558
03015 mRNA surveillance pathway
106791558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcf03019
]
106791558
Messenger RNA biogenesis [BR:
pcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
106791558
mRNA cycle factors
P-body specific factors
106791558
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
106791558
NCBI-ProteinID:
XP_014612732
LinkDB
All DBs
Position
Unknown
AA seq
1147 aa
AA seq
DB search
MSETDNNIGQEMETPTEPDAVSEEDKQFLLDYVKETEQRLTNKEEIRAANLNPTRPPDTY
FSKLDSSLKRNTTFVKKLKSFSVNQLDAVLKDMANLNLTKYVSEVATALVDAKLKMTDIS
SAIKACSFLHQTYAEFSSHFFENWQRILSLKIGEKIANPSKLRVDLRFYAELVNAGIFTH
KQGLPLLGSVLTVLINMDKEEHNNASIILSFCRHCGEDYAGLVPRRVRELSEKLNITIPK
SKLLSPDKQQNVRYLLRDYYNSLCKHLLKEHKELQAFEKQNRKILQTRGELSAERKEKLE
SLQVSYDRLLSGVQSYSDTLDEPIPELPVDVEIKAEAEETLKMINEGEENSILEDMWGDD
ETRRFYEVLPDLVVFLPGSYPKEVPKSDAPITEETLDEDITFDELEETEKVDEPEVETEE
PQVSNISNKILLDAFLSHLPNCVNREMIDNAAVDFLINLNSKHNKKKLVKALFGVSRIRL
DLLPFYSRLAAILYHVMPEVANDLCLMLKHDFKYHVRKKDQINIESKIKVVRYIGELVKF
KLYSKIEALYCLKVLLHDFTHHHIEMACNLLETCGRYLFCSPDSHQRTKVYLEQMMRKKA
VTALDSRYVTIIENAYYFVNPPESTGGVSKKDRPPIHEFIRKLLYQDLSKTNTDKVLKWM
RKLDWEDESVSSYAIKCLTAAYNVKYLNIRCVGSLLAGLVAHYETIGPHVVDGVLEDIRL
CMEINLPKFNQRRIAMVKYLGELYNYRMVESGDIFRTLYLLITFGINMDHSIPSILDPPE
HLFRIRLVCTLLETCGQYFSGGSSKKKLDYFLIFFQNYYWFKYTDPVWTPENPFPVGIDY
MYRDTLTMLRPKMPLFNSFKEAQCAVQELKNILYPTLGSITTAEDVEHNEGDSEMSVIIE
GDEDLSMTPGNGGGDAKGIGDLHFEESEDCSEAQSEEDWTAEAERDAGTQENTQGEQSLS
EGATEGVIMDGTELNAALPAGPKKMTCPEDDDFLSALDKMVSDNIQDRMRDAVKPQQVDI
SVPLHIKSTKKTYEQLQVQSSDNSMVDFTLMLRKGNKQQYKNLAVPVSSELAMNLRNREQ
EQKEEKERVKRLTLNITERQEEEDYQETINQGTRPVTVNLNRERRQKYNHPKGAPDADLI
FGPKKIR
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaacggataataatattgggcaagaaatggagacacctactgagcctgatgca
gtctcagaagaagacaaacagtttttactggactatgtaaaagaaactgaacaaagatta
acgaataaagaagaaattagggctgctaatttgaatcctacaagaccaccagatacatat
ttcagtaaattggactcgagtcttaaaagaaatacaacatttgttaagaaacttaaaagt
tttagcgtaaaccagttggatgcagttctaaaagatatggctaatttaaatttgacaaag
tatgttagcgaagttgctaccgcattggtcgatgctaagttgaaaatgactgatatatca
tcggcaattaaagcttgtagttttttacatcagacgtatgcagagttttcatctcacttc
tttgaaaactggcaaagaatattgtccttaaaaattggagaaaaaattgctaatccaagt
aaactaagagtggatttacgattttacgcagaacttgtaaatgctgggatttttacgcac
aagcaaggcttaccgcttcttggttctgtattaactgttttaattaatatggataaagag
gaacacaacaatgcgagcattatattaagtttttgtcgtcattgcggagaagattacgca
ggtcttgttcctagaagggtaagagaattatcggaaaaattaaatattacaataccaaaa
agcaaattactttctcccgacaagcaacaaaatgtaagatatttactacgagattattac
aattcattgtgtaagcatttactgaaagaacacaaagagcttcaagcatttgaaaaacaa
aatcgtaagattttacaaactagaggtgaattgagtgcagaaaggaaagagaaattagaa
tctcttcaagtatcttatgaccgtcttcttagtggggtacaaagttattccgatacatta
gatgaaccaatacctgaacttcctgtagatgtagaaataaaggcagaagctgaggaaaca
ttaaaaatgattaacgaaggagaagaaaatagtattctagaagatatgtggggagacgat
gaaacaaggcgattttatgaagttctacctgacttagtagtatttttacctggatcgtat
ccaaaagaagtaccaaaatctgacgctcctattacagaagaaactttagacgaagacata
acgtttgatgaattagaagagactgaaaaagtagatgaaccagaagtagaaacagaggaa
cctcaagtttccaacataagtaataaaatattattagatgcatttcttagtcatttgcca
aattgtgtcaatcgcgaaatgattgacaatgcagcagttgattttctcataaatttgaat
tcaaagcataataaaaagaaactagtaaaagcattatttggtgtttctagaatacgttta
gatttattgccattctattctcgtttagctgcaattctatatcatgtaatgcccgaagta
gctaatgatttatgtttaatgttaaaacatgatttcaaatatcatgttagaaaaaaggat
caaattaatattgaatcaaagataaaagtagtacgttatataggcgaacttgtcaaattt
aaactttattcaaaaatagaagcattatattgtcttaaggtattgctgcatgattttact
caccatcacattgagatggcatgcaacttgttggaaacttgtggaagatatcttttctgt
tctcctgactctcatcaaagaacaaaggtctatttagaacagatgatgcgtaaaaaggct
gttactgcattagattcccgttacgtaacaataattgaaaatgcatattactttgtaaat
cctcctgaatcaactgggggagtgtctaaaaaagatagacctcctatccacgaattcatc
agaaagcttctatatcaagatctttctaaaacaaatacagataaggtacttaaatggatg
cgcaagttagactgggaggatgaaagtgtatcatcgtatgctataaaatgtcttactgct
gcgtacaatgtaaaatatttaaatattcgatgtgttggaagtttattagctggattagta
gctcattatgaaacaataggtcctcacgtggtagatggtgtattagaagacataagactg
tgtatggaaattaatttacctaaattcaatcaacgtcgtattgccatggttaagtatctt
ggagaattgtataattatcgtatggtcgagagtggtgatatttttagaactttatatcta
ttaatcacatttggtatcaacatggatcattccattccaagtattcttgatccacccgaa
cacttatttagaattagattggtatgtacacttttagaaacctgtggacaatactttagt
ggaggttcgagtaagaaaaagctcgattactttttgatattctttcaaaattattattgg
ttcaagtatacagatcctgtatggactcctgaaaatcctttcccagtaggaatagattat
atgtatcgagatacattgaccatgctcaggccaaaaatgccactttttaacagctttaaa
gaagctcaatgtgctgttcaagaattaaagaacatattgtatccaactttaggaagtata
acaaccgcagaagatgttgagcataacgaaggagattctgaaatgagtgtaatcatagaa
ggagatgaagacttatctatgacacctggaaacggaggtggcgatgcaaaaggaatagga
gatttacattttgaagaatccgaagactgttcagaagcacaatccgaagaagattggaca
gcagaagcagaaagagatgcaggaactcaagaaaatactcaaggagaacaaagtttatcg
gaaggtgctactgaaggagttataatggatggtacagaattaaatgctgctctaccagca
ggtcccaaaaaaatgacctgcccagaagacgatgattttctttctgcgcttgacaaaatg
gtatctgataatatacaggatagaatgcgcgatgctgttaaaccacaacaagttgatata
tctgtaccattgcatattaaaagtacaaaaaaaacatacgaacaattgcaagtacaatca
tctgacaattctatggtggacttcacgcttatgcttagaaagggtaataaacagcaatat
aaaaatttagctgtaccagtatcctcagaattagctatgaatcttagaaatcgtgaacaa
gaacaaaaagaggagaaggaacgtgtaaaaagattaactcttaatataacagagagacaa
gaagaggaagattatcaagaaactattaatcaaggcacacggccagtaacagttaattta
aatagagaacgacgacaaaaatataatcatcctaaaggtgcacccgatgctgatcttata
tttggaccaaaaaaaattcggtaa
DBGET
integrated database retrieval system
