Polistes canadensis: 106791815
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Entry
106791815 CDS
T05611
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
pcf
Polistes canadensis
Pathway
pcf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106791815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcf03400
]
106791815
DNA repair and recombination proteins [BR:
pcf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
106791815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
MtrG
Motif
Other DBs
NCBI-GeneID:
106791815
NCBI-ProteinID:
XP_014613242
LinkDB
All DBs
Position
Unknown
AA seq
923 aa
AA seq
DB search
MAVQPNQQFTMDPSSQISFVRYFTNLPEKSNSTIRFFNRGDYYTLHGSDALFAAKEVFKT
TSVCKMLGAEPYKTEGIILNKSHFEAFIRDLLLVKQYRVEVYINQGSVKNQNWVLEYKGS
PGNLSQFEDILFANNDIALGVSVIAIKLGTEGKSKILGLSHLDTVANSFSVCEFQDSESF
SNLESLIVTLNPKECLLIQGDSSYEFDTLKQVIERSNVLVTLRKKSEFSNDSVVQDLNTL
LKFTKGQQQNAQSLPEINLTLAMSATSALIKYLDLTSDEGNIHQFSIEQIKQSRYLKLDT
AAIKALNIEHCSNVSSNLNGNVPDSILTLLDKCKTPQGHRLIAQWIRQPLKDLALIKERH
DIVEVLVKNNELRSTLSEDHLRRIPDLQQLAKKLSKKKAHLQDCYKIYMSVSHLPRLIQQ
FSDVSNITALKELIIDPLKELIKDMDKFQQMIEQTIDLDAAEKGDFLVHPDFDDELKELK
KEMDEMEEKVQLQLSKVAEDLGVESGKSLKLETNQQLGYYFRITLKEEKILRNKKHYTIL
DSNKNGVRFRNNKLNELNDEYIAAREKYTNQQKTVVTEIIEIAAGYTTPIKSIGDVIACL
DVFVAFALTAANAHITYIRPEMLSSEHGEFNLVQVRHPCLEIQESVDYIANDVYFKKDKV
HCYIITGPNMGGKSTYIRSAGVTALMAHIGSFVPCEKATISLLDCILARIGADDSQLKGL
STFMMEMIETAAILRTATSNSLVIIDELGRGTSTYEGCGIAWSIAEHLAKEIKSYCLFAT
HFHEITRLSEEIPTVKNQHVTALVQNDKLTLLYKVKPGVCDQSFGIHVAKMANFPDNVIE
FAKRKQTELEDHQGTIFKGSDCPEKKRKIIKEADELITEFLNECKTLDKSLSTEQLRDKI
LEYKKKICSRENPYIDTLLSEVY
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggctgtacaaccgaatcagcaatttactatggatccatcttctcaaatcagttttgtc
agatatttcacgaatcttccagaaaaatcaaattctactatacgattttttaatcgaggt
gattattatacattacatggaagcgatgctttatttgctgctaaagaagtttttaaaaca
acatctgtttgtaaaatgctcggtgctgaaccttataagactgaaggtattatactgaat
aaaagtcattttgaggcatttatacgtgatttattattagtaaaacaatatagagtggaa
gtttacattaatcaaggatcagtaaaaaaccaaaattgggtattagaatataaaggttcg
cctggtaatctatcacaatttgaagatatattatttgctaacaatgatattgcacttgga
gtatcagtaattgctataaaattaggaacagaaggaaaatccaaaattttaggattaagc
catcttgatacggtagcaaattctttctcagtttgtgaattccaagatagtgaatctttc
tcaaatttagaatcacttattgttacacttaatccaaaagaatgtctactaatacaagga
gatagtagttatgaatttgatactttgaaacaggtaatagaaagaagtaatgttttagtt
actttaagaaaaaaaagtgaattttctaatgattcagttgtacaagatttaaatacatta
ctcaaatttacaaaaggtcagcaacaaaatgcacaatccttacctgaaataaatttaaca
ttagctatgtcagctacatctgcattaattaaatatttggatctgacatctgatgaagga
aatattcatcaatttagcatagaacaaataaaacaatcacgttatttaaaattagataca
gcagctataaaggctcttaatattgagcattgttcaaatgtatcttctaatttaaatgga
aatgtacctgatagtattttgactttattagataaatgcaaaactccacaaggtcataga
ttaattgcacaatggattagacagcctcttaaagatttggcacttataaaagaaagacat
gatatagtagaagtattagttaaaaacaatgaattaagatctactcttagcgaagatcat
ctgagacgaatacctgacttacagcaattagccaaaaaattatctaaaaagaaagctcat
cttcaagactgttataaaatttatatgagtgtatctcatttgccaagactgatacaacaa
ttttctgatgtttctaacataacagccttaaaagaattaattatagatccattaaaagaa
cttatcaaggatatggacaaatttcaacaaatgattgaacaaactattgatttagatgca
gcggaaaagggagattttttagttcatcctgattttgacgatgaattaaaagaactcaaa
aaagaaatggatgaaatggaagaaaaagtacaattgcagttaagtaaagtagctgaggac
ttgggtgtagaatcaggaaaatcattaaaattggaaaccaatcaacagttgggctattac
tttcgaataacgttaaaagaagaaaagatactaagaaataaaaaacattatactatatta
gactctaacaaaaatggtgtaagatttagaaataataagttaaatgaattaaatgatgaa
tatattgctgctagagagaagtatacaaatcaacagaaaactgttgtcacagaaattatt
gaaattgcagctggatataccactccgattaaaagtattggagacgttattgcgtgcctt
gacgttttcgtggcatttgccttaactgcagcaaatgcacacataacatatattcgccca
gaaatgctttctagcgagcatggtgaatttaatcttgttcaagtgagacatccttgtttg
gaaatacaagaaagcgtagattatatcgctaacgatgtatattttaaaaaagataaagtt
cattgttacattataactggtccaaatatgggtggtaaaagtacgtatatacgttctgct
ggtgtaactgcattaatggcacatattggaagttttgttccttgtgaaaaagcaacaata
tctttattggattgtatattggcaagaattggagctgatgattcacaattaaaaggactt
tcaacgtttatgatggaaatgatagaaacagctgctattttaaggacagcaacatctaat
tcacttgtaatcattgatgaacttggtagaggtacatcaacatatgaaggatgtggtatc
gcttggtccatagcagagcatttagcaaaagaaattaaatcttattgcctatttgcaacg
cattttcatgagattacgagactttctgaagaaatacctacagttaaaaatcaacacgtg
acagctcttgtacaaaacgataaacttactttactttataaagtaaaacctggtgtttgc
gatcaaagctttggtattcatgttgctaaaatggctaattttccagacaacgtaatagag
tttgctaaacgaaaacaaacagaattagaagatcatcagggaacaatttttaaaggatct
gattgtccagaaaaaaagcgaaaaattataaaggaagctgatgaattgataactgaattt
ctcaatgaatgcaaaacactagataaatctttgtcaactgaacagctaagagataaaatc
ttggaatataaaaaaaagatttgttctcgtgaaaatccatatatcgatacattattatca
gaagtttactaa
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