Polistes canadensis: 106791862
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Entry
106791862 CDS
T05611
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pcf
Polistes canadensis
Pathway
pcf03022
Basal transcription factors
pcf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106791862
09124 Replication and repair
03420 Nucleotide excision repair
106791862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcf03021
]
106791862
03400 DNA repair and recombination proteins [BR:
pcf03400
]
106791862
Transcription machinery [BR:
pcf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106791862
DNA repair and recombination proteins [BR:
pcf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106791862
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Voldacs
Motif
Other DBs
NCBI-GeneID:
106791862
NCBI-ProteinID:
XP_014613321
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MTTSSEDVLMQVGQVRYKKGDGTLYVMNERIAWMLDNRDTVSVSHKYADIKLQKISPEGK
SKIQLQVVLHDGSSSTFHFVNRNGQEAQIKDRDDVKELLQQLLPKFKRKVNKELEEKNKM
LQENPVLLQLYRDLVIPQVITSEEFWTQHAAEYTRAKKVQRQEIGVNGAFLADIKPQTDG
CNGLKYNLTIDIMECIFKTYPAVKRKHQENVPHKMTEIDFWTKFFQSHYFHRDRINAGTK
DLFTECAKIDDQELKKDIQSGINDPLVDITSFEDQTLDENYGSGLSKSDKTSGNIVHQSM
IKRFNQHSIMVLKASTAKQSTQNYQPQLNGSTPSASKASANDESDFQPKNKKLRIQEKLI
YDDLDASCDSNTDNGAPLRLTHVDRYLHGPVPGYGITEAPSDELLMAVNQLQKEAASWIS
GNSLPRQAPISLVTPAAAVSALGELTPGGSLMKSFREESLGQLIPKDLETELRNVYVCIC
QLLRHFWRSFPPTTPQLEEKAIRMHEALHRFHSVKLKPFEDRVQREFSAVSQHLTSHLNQ
LLNTAYRKFALWQQRKMQMR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgactacgtcgtcggaagatgttttaatgcaagtgggacaagtacgttacaagaaggga
gatggtactttatatgttatgaatgaacgaatagcttggatgctcgataatagggatact
gtatctgtcagtcacaaatacgctgatattaaattacaaaagatatcgcctgaaggaaaa
tcaaagatacaactacaagtggttctgcacgatggatcttcgtctacgtttcattttgtt
aatcgtaatggacaggaagcacaaattaaggatcgtgatgatgttaaggaattactacag
caactgttaccaaaatttaaaaggaaagttaacaaagaattggaggaaaaaaataaaatg
ttacaagaaaatccagtattgttacaattatatcgcgatttagtaataccgcaagtgatt
acctctgaagaattttggacacaacatgctgcagaatacacacgtgctaagaaagtccaa
cgtcaagagataggtgtcaatggtgcttttctagctgatattaaaccacagaccgatggt
tgcaatgggctgaaatataatttaactatagatattatggaatgtatatttaaaacttat
ccggcggtcaaaagaaaacatcaagaaaatgtgcctcacaaaatgacagaaattgatttc
tggactaaattttttcaatcacattattttcatcgtgatcgtatcaatgcagggaccaag
gatctatttaccgaatgtgccaaaatagatgatcaagaacttaagaaagatattcaatct
ggaataaacgatcctctggttgatattacttccttcgaggatcaaacattagatgaaaat
tatggaagcggcttaagtaaatccgacaaaacttcagggaatattgttcatcagagtatg
atcaaaagatttaatcagcatagtattatggttttgaaagccagtactgctaaacaatct
acacaaaattatcaaccgcagttaaacggttcaaccccatcagcaagcaaagcttctgcc
aatgatgaatcagatttccaaccaaagaataaaaagcttaggatacaagaaaaattaatt
tatgatgatctcgatgctagttgcgactcaaatacagataatggtgcaccattacgttta
acacacgtagacagatatttgcatggtcctgtaccagggtacggaattacagaagcaccc
tcagatgaacttttaatggcagtaaatcaattacaaaaagaagcagcctcttggatttca
ggaaacagtctacctagacaagctcctatatcattagttactccggctgctgctgtatca
gctttaggagaattgacacccggaggatctcttatgaaaagctttagagaagaaagtctt
ggacaattaataccaaaggatttagaaacagaactacgtaatgtatatgtctgtatatgt
caattgttaaggcatttttggagaagtttcccaccaacgacaccacaactcgaggagaaa
gcaatcagaatgcacgaagccttacatagatttcattcggttaaacttaagccatttgaa
gatcgcgttcaaagagaattctctgcggttagtcaacatctaaccagtcatttaaatcaa
ttattaaatactgcatatagaaaattcgccctatggcaacaacgtaaaatgcaaatgaga
tag
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