Polistes canadensis: 106792301
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Entry
106792301 CDS
T05611
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit PAN3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
pcf
Polistes canadensis
Pathway
pcf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106792301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcf03019
]
106792301
Messenger RNA biogenesis [BR:
pcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106792301
mRNA degradation factors
3'-5' decay
Pan complex
106792301
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
106792301
NCBI-ProteinID:
XP_014614111
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MDPSMFVAYTPQTNGVPLESKLATYMNRQSPGTTLNANAVTKHLSNLSLDSQKKVTASPE
FVPGRGLTGSNSSSPNLFNNSYHSQENVGGTTYFYLGNAATDAVGGEEGTDGIATMGTGQ
AGYVYPGTPAHLQPVKPSKTSSSSSSSAPSTPPPQAAPSYFISESLRMDILQKNALVLAQ
PDMVRFPDLPNEVDNYHELCPLEPTHKPTSTVLGYQTSTYKATSIKSGTRYCLRRVHDFR
LANTKCMVLVDMWKRLAHTNLVQLREVFTTKAFGDHSMVFVYDYHPGSETLLNKHFSSTE
LNGYTDPFSSDPNAPRPYSHTKNTILRQQHSSMLPESVIWSYIIQLTAALRVIHAAGLAY
RCLDPTKVLLTSRTRLRLSCVAIPDVVTFDGTATNPLTLIPHYQQEDLIALGKLVLALAC
RSLLAVHRDNMQASLELVARSYSTDLRNLILYLLSNQARRSVTDLMPMIGARFYTQLDAA
QLRSDVLENELAKELENGRLFKLLVKLATINERPELNMEPTWAETGDRYMLKLFRDYVFH
QVAADGRPWLDMAHVVSCLNKLDSGSHDKICLMSRDEQSVLVVSYAELRQCLETSFGELV
QSTKDAV
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggacccatcaatgttcgttgcttacacccctcaaacaaatggagttccattggagtcc
aaacttgctacctacatgaatcgtcaaagtcctgggacaacattaaatgctaatgcagta
acaaaacatctatccaatctttcccttgactcgcagaagaaagtaactgccagcccagaa
tttgtaccagggagaggtttaactggtagcaatagcagttcccctaatctttttaataat
tcttatcactcccaagaaaatgtaggtggcacaacttatttttatcttggcaatgctgcc
acagatgccgttggaggggaagagggaacggatggcattgctactatgggaacaggtcaa
gcaggctatgtatatccgggtacgccggctcatttgcaacctgtcaaaccatccaagact
tcttcatcaagtagctcctctgccccttccacacccccgccgcaagcagctcctagctat
tttatcagtgaaagtttacgaatggacattcttcaaaagaatgcattagtattagctcaa
cccgatatggtgagatttcctgatttaccaaatgaggtagacaattatcacgagttatgt
ccattggaacctacccataagccaacttctacggtacttggatatcaaacttcgacgtat
aaagcaaccagtataaaaagtggtacacgttattgtttacgtcgtgttcatgatttcaga
ctcgcaaatacaaaatgtatggttttggtcgatatgtggaaaagactagcgcacactaat
ttagttcaattaagagaggtctttactactaaggcctttggcgatcattccatggtattc
gtatatgattatcatcctggatcagagacattattaaacaagcatttttcatcgactgaa
ttgaatggttataccgatccattttcttcggatcccaatgctccacgtccgtatagtcat
acaaaaaatactattcttaggcaacaacatagtagtatgcttcctgaaagtgttatttgg
agttatatcattcaactcactgctgccctacgtgtaattcatgcagctggcttggcatac
aggtgtttggatcccaccaaagtattattaacgtcacgtacacggcttcgtttgagttgc
gtcgctataccggatgttgttacatttgatggaactgcaacaaatccacttacactcata
cctcattatcaacaagaggatttaatagcactaggaaagttggtattggctttagcatgt
cgcagtcttcttgccgtccatcgcgacaatatgcaggcctctctcgagctcgtcgcacga
tcttactccaccgatcttcgaaatcttatattatatctactttcaaatcaagctcgaaga
agtgtaacagatctcatgccaatgattggagcacgtttttatactcaattagatgctgct
caacttaggtctgatgtactcgagaacgaacttgctaaggaattagaaaatggaagatta
tttaagttactcgttaaattagctaccattaatgaaagaccagaattgaatatggaacct
acttgggcagaaactggtgataggtatatgctcaaattatttagggattatgttttccat
caagtagccgccgatggaagaccttggttagacatggcacatgttgtctcttgcttaaat
aagcttgactctggatctcatgataagatatgcttaatgtcacgggatgaacaaagtgta
ttagttgtaagttatgcagagttacgacaatgtttggaaacttcgtttggagaattggta
caatcaacaaaagatgctgtctag
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