Polistes canadensis: 106793049
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Entry
106793049 CDS
T05611
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
pcf
Polistes canadensis
Pathway
pcf03013
Nucleocytoplasmic transport
pcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106793049
09122 Translation
03013 Nucleocytoplasmic transport
106793049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcf03019
]
106793049
03041 Spliceosome [BR:
pcf03041
]
106793049
Messenger RNA biogenesis [BR:
pcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
106793049
Spliceosome [BR:
pcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106793049
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
ATAD4
DUF1589
Motif
Other DBs
NCBI-GeneID:
106793049
NCBI-ProteinID:
XP_014615132
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MGKENDTDNSKKRRKSISTGTIPWLKDGDMYKTIITNEEKEALERSPESDSQSFLSTCEN
IRKAMSKIAKLKMSNDSNAEEEVHELQVQTSLSFIELKKLNRMEKFRTKFARDSLVAAKS
SVDSKHLQLQNLLYEVMHLKKEVIKCLQFKSKDELIQLVPEEEFYGEAPESISRPEITKM
NPHQLRLARLEWELTQRKQLAALCDELTESKKAVTADMESKQTRLDNLAPQLLAILEASK
PLQESLGLPLDKVRQEHQKAALLASPLYVLYAKATAYRDAYDNTIIIKVEGDKDEAKRTN
NQDGLQESDSDPETQLENIVEETPVHKKRHHRLSKEARQEEKRSKLLQRHPLNVTLVISM
KTETKLTLQFFYMIHLKVVTVESKLETDVSGGISAGDMLVSESVLRELYPNDLGIESPNP
ANHYQLARHNLGSFSSLGLGIPYRWAQRMAGLHFISSNSHDQKPTVQESTQDSVVSVLKE
IKRRVKARLELCREIRRLESGNLPILINTVNPLPQKITTSLHRFTTMTWKNYSNYTSAPI
YREGLVSSVDIFYEAVLRRGSSELIARIAIKPDYPKVAALFSISISPMVPASVDILRDIE
REVNVMWTKPPTISAQLQRLRACFDIYLETESMAPKEKIFFHPVRGRTRARPYKYLALGG
GIFTHR
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagaaaatgatacagataattccaaaaaaaggagaaaatctatcagcactggt
actattccgtggctaaaagatggagacatgtataagactataatcaccaatgaagaaaaa
gaggctttggaaagatcacccgaaagtgattcgcaaagtttcttatctacatgtgaaaat
atccggaaagccatgagtaaaattgctaaattaaaaatgagcaatgattcaaacgcagag
gaagaagtacatgagttacaagttcaaacatcgttatcatttattgaattaaagaaactc
aataggatggagaagtttcgtactaagtttgctcgagattctttagttgcggctaagagt
agtgtcgatagcaagcatttacaattacagaatttattatacgaggtcatgcatttaaaa
aaagaagttattaaatgtctacaatttaaatcaaaagatgagttgatacaacttgtaccg
gaagaagaattttatggagaagcacctgaaagcatatctagaccagaaataacaaaaatg
aacccgcatcaattaagattagctcgacttgaatgggaattgactcaacggaaacagcta
gctgctttatgcgatgaattaactgaaagtaagaaagcagttacagccgatatggaatct
aaacaaactagattggataatcttgcaccacaacttctagccatactagaagcaagtaaa
ccattgcaagaaagtctcggattacctttagataaagttagacaagaacatcagaaagca
gctttgctcgcatcacctttatatgtactttatgcaaaagcaactgcatatcgagatgca
tatgataatacaattatcataaaagtggaaggagacaaagacgaagcaaagcgtacaaat
aatcaagatggattacaagaatcagattcagatcctgaaactcagttagagaatatcgta
gaagaaacacctgtacacaaaaaaagacatcacagattgtctaaagaagctagacaagaa
gaaaaaagatctaaattattgcagaggcaccctttaaacgtaacacttgtcatttcaatg
aaaactgaaaccaaattaacgttacaattcttttatatgatacatttaaaagtggttacg
gtagaatctaaactcgaaactgatgtttctggaggcattagtgctggagacatgctcgta
tcagaatcagttcttcgtgaattatatcccaatgatttgggtatagaaagtccaaatcct
gccaatcattatcaactagcgcgtcacaatttaggatcattttcaagtctaggattaggt
attccttatagatgggctcaaaggatggctgggttgcattttatttcatctaactctcac
gatcaaaagcctaccgttcaagaatcaacgcaagatagtgttgtaagcgttctgaaagaa
ataaaaagacgagtaaaagctagattagaattatgtcgagaaattcgtcgattggaatct
ggaaatttacctattcttataaataccgttaatccactgccacaaaaaattacaacttcg
ttgcatagatttactactatgacatggaaaaattattctaattatactagcgcacccatt
tatcgagaaggattggtatcatctgttgatatcttttatgaagctgtattacgtcgtgga
agcagtgaactcatagctaggattgctataaaaccagattatccaaaagtagctgcgttg
ttcagcataagcataagtcctatggttcctgcatcggttgatattttaagagacattgaa
cgggaagttaatgttatgtggacaaaacctccgacgatatcagcacaattacaacgttta
agagcatgcttcgatatatatttggaaacggaaagtatggcacctaaagaaaaaatcttt
ttccaccctgtcagaggacgtacacgtgcaaggccttacaaatatttggcattaggagga
ggaatattcactcatcgttag
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