Polistes canadensis: 106793538
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Entry
106793538 CDS
T05611
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
pcf
Polistes canadensis
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcf03021
]
106793538
Transcription machinery [BR:
pcf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
106793538
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_14
TPR_8
TPR_12
TPR_16
TPR_CcmH_CycH
TPR_17
TPR_11
TPR_10
TPR_Slam
TPR_7
TPR_9
PknG_TPR
ARM_TT21_4th
ANAPC3
Peptidase_S41_N
Motif
Other DBs
NCBI-GeneID:
106793538
NCBI-ProteinID:
XP_014616035
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MSGSIEIPLRDTDEVIELCLDQLPDGDEVLGILRQEHAQLHVWVNLALEYYKQQKIEDFI
KILESSRIDANIDYRDFEKDQMRALDMLAAYYVQEANKEKNKDKKRDLFTKATLLYTTAD
KIIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRG
ALAFYKKALRTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERALQLDGQCVGALVGLSVL
KLNQQQPDSIRAGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYNKVQHLALHAFHNTEN
EAMRAESCYQLARAFHVQGDYDQAFQYYYQATQFAPSVFVLPHFGLGQMYVYRGDAENAA
QCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKVTEQFPDDVEAWIELAQI
LEQSDLNAALNAYGTATRILKEKVQADIPPEILNNVGALHYRLGNLEEAKKNLEESLERS
KDDALHDSVYYNSIAVTTTYNLARLNEALCIFDRAEKLYKDILKEHPNYVDCYLRLGCMA
RDKGQIYEASDWFKDALRINNEHPDAWSLLGNLHLAKMEWGPGQKKFERILKNPTTSTDA
YSLIALGNIWLQTLHQSGKDKEREKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHKG
CVNEARDIFAQVREATAEFCDVWLNIAHIYVEQKQYVSAIQMYENCLRKFYKYNNVEVLQ
YLARAYLKAGKLKESKLTLLKARRVAPQDTVLLYNIALVLQRLATQILKDEKSTLTTVLQ
AVHELGLSHKYFQYLSAHGDRMEQMAETEARKCQDLLSQAQYHVARARRLDEEEKTLRRK
QEEERQAFKMRQTEEQRKLEEIRRQKEEEMLQKRQEYVEKTKNALVFGEMPSEKPGRKGK
KTRTDQYISDSGGSGNDEGREEVPREKKRKRKASGETKEKKGKGKGKRKRDMASGDSGSD
SDRRKPKRNRKMGTKKDKQFRKSTTDTPKGKMPLSKETISTSESDSDSGGLKIASGAESD
NDKRPSKSRKIVSDSENSRASRSRSRSRSRSRSKSGSRARSSSRSRSRSRSHSRSRSHSP
SRSRSQSGSRSRSRSPSRSQSRSKSRSPSRSKSRSPSRSKSRSKSRSKSRSKSHSKSRSK
SRSKSRSRSRSVSRSRSRSRSKSKSGSQSESEKENQGSQRIVSGSEGSRGSSRAASRSKS
RSRSVSRSPTHSRSASRSQSRSRSRSRSISQSGSPDK
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgtctggctccatagaaatcccacttcgtgatacagatgaggtgatagaactttgttta
gatcaattacctgacggcgatgaagttcttggtattttacgtcaagagcatgctcagctc
cacgtatgggtcaacttggccctggaatattacaaacaacaaaagatcgaagactttatt
aaaatacttgaatcttcgcgaattgatgcaaatattgattatcgtgattttgaaaaagat
caaatgcgagcattggacatgttggcagcgtactatgtacaggaagcgaataaagaaaaa
aataaagacaagaaaagagatctttttactaaagcaacgttattgtatacaactgctgat
aaaataatcatgtatgatcagaaccacctccttggtagagcttatttctgccttttggaa
ggggataaaatggaacaagcagatgcacagtttaattttgtattgaatcaatcgcctaat
aatattccctctttactcggtaaagcttgtatcgctttcaataaaaaagactatagaggt
gcacttgcgttttacaagaaagctctaagaactaatcctaattgtccagctgctgtaaga
ttaggaatgggacattgttttatgaaattaaataatcaagaaaaagcgcgattagccttt
gaaagagctttacaattagatggacagtgtgttggagcattagttggactttctgtttta
aaattaaatcaacaacaacctgatagtatccgggctggtgtacaaatgttatccaaagct
tatacgattgattcaacaaatcctatggtgttgaatcatttagctaatcacttcttcttt
aaaaaggattataataaagtacaacatttggcattgcatgcgtttcacaatacagaaaat
gaagcaatgcgggcggaaagttgttatcaattggctagggcatttcatgtacaaggagat
tatgatcaagcctttcaatattattatcaagcaacacaatttgctccatctgtttttgtg
ttacctcattttggtttaggtcaaatgtacgtttatcggggtgatgcagaaaatgctgca
caatgtttcgaaaaagtattgaaagctcaaccaggaaattatgaaacaatgaagattctt
gggtcgctctatgctaactcaagctctcaatcgaaacgtgatatcgctaaaaatcatctt
agaaaagtaacggaacaatttccagatgacgtagaagcttggattgaattagctcaaatt
ttagagcaaagtgatcttaatgcagctttaaatgcgtatggaacagcaacaaggattttg
aaagaaaaagttcaggctgatattcctcctgagatattaaataatgtaggtgctttacat
tacagattaggtaatttggaagaagctaaaaagaatttagaagaatctttagaacgttcg
aaagatgatgctttgcacgattctgtctattacaattcaatagcggttacaactacttac
aatttggcgcgtcttaatgaagctctctgcatctttgatcgtgcagaaaaattgtacaaa
gatattttaaaagagcatccaaattatgtagattgttatttaagacttggatgtatggcg
agagataagggacagatatacgaagcatccgattggtttaaggatgctttgagaattaat
aatgaacatcctgatgcatggtcacttttgggtaatttgcatttggcaaaaatggaatgg
ggtccagggcagaagaaatttgaaagaattcttaaaaatcctactacaagtacagatgcc
tattctttgatagctttaggaaatatttggctacaaacgcttcatcagagtggaaaagac
aaagaaagagaaaaaagacatcaggatagagcattagctatgtacaaacaggtgttaaga
aatgatccgaaaaatatttgggcagcaaatggaatcggtgcagtgctagcacataaaggt
tgcgtgaatgaagctagagatatttttgctcaagtgagagaagcaacagcagaattttgt
gatgtatggttaaacattgctcacatttatgtagagcaaaagcaatacgttagtgctatt
caaatgtatgaaaattgtttacgtaaattttataaatataataacgtagaagttctacag
tatcttgctagggcatatcttaaagctggaaagttgaaggaatcaaaattaacactttta
aaggctcgcagagtagctccacaagatactgttttgttatacaatattgcattagtgtta
caacgtttagcaacacaaattttgaaagatgaaaagtcaacgcttactactgtattacaa
gcagtacatgaattgggtctttctcacaaatacttccaatatttatctgctcatggcgac
agaatggaacaaatggcagaaacagaagcgcgaaagtgtcaagatttattatctcaagcg
caataccatgttgctagagcaagaagattggatgaggaagaaaagacacttagaaggaaa
caagaagaagaaagacaagctttcaaaatgcgtcaaacggaagaacaacgaaaattggaa
gaaatacgccgtcaaaaagaagaagaaatgttacaaaaaagacaagaatacgttgaaaaa
acgaaaaatgcattggtatttggtgagatgccttcggagaagcctggaagaaaaggtaaa
aagacaagaacagatcaatatattagtgacagtggaggatctggtaatgatgaaggtaga
gaagaagttccaagagaaaagaaacgtaaaagaaaagctagcggtgagactaaggaaaag
aaaggaaagggtaaaggaaaacgaaaaagagatatggcaagtggagacagtggttcagat
agtgatcgtagaaaaccaaaacgtaatagaaaaatgggtacgaaaaaggataagcaattc
cgcaaatctacaactgatactccaaaaggaaagatgcctttgtcaaaagaaacaatatca
actagtgaatctgacagcgatagtggaggtcttaaaattgctagcggtgctgaaagtgat
aatgacaaacgaccatcaaaaagtagaaagatcgtatccgattcagaaaattcacgtgct
tcacgttccagatcacgttccagatcacgttctagatcgaagtcaggaagtcgtgcaaga
agtagttcacgttcgcgttcgcgttcacgttcccattcacgatctcgatctcattcacca
tctcgatcacgatcacaatcaggatcacgatcacgatcacgttcaccttcacgatcgcaa
tctagatctaaatcacgatcaccttcaagatctaaatcacgatctccctctagatctaaa
tcccgatctaaatcccgatctaaatcacgatctaaatctcattctaaatcacgatctaaa
tcacgttcaaaatcacgatcacgatcacgttcagtatcgcgatctagatctcgatctcgc
tcaaaatccaaatctggatctcaaagcgaaagtgagaaagaaaatcaaggaagccaaaga
attgtatctggctcagaaggttctcgtggatcgtcacgcgcagcatcacgatcaaaatca
cgatcacgctcggtttctcgatcaccgacgcattcacgttctgcctctcgatctcaatcc
cgatcaagatcaagatcgagaagtatttcgcaatcaggaagtcccgataaataa
DBGET
integrated database retrieval system
