Polistes canadensis: 106793568
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Entry
106793568 CDS
T05611
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
pcf
Polistes canadensis
Pathway
pcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106793568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcf03041
]
106793568
Spliceosome [BR:
pcf03041
]
Complex C
Other components
Step II factors
106793568
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_EIPR1
WD40_RFWD3
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_SCAP
PQQ_2
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
106793568
NCBI-ProteinID:
XP_014616089
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MLALKDYGSSDGESGSENESTVDNNEDKIKEYDKHVNNDDDVSPRDSIITTDKLISSIGL
QICSAPEVVSTGTELCVKHIDSTASMVTHNPKYEELFAPDLGPENPFKTQQQRATKNMLS
GYVEKAYISEFQFENQRRTFTSYGYALDPTVDGSADEGKTLIGAKEAAEESGGKTVFEST
MLRPVDKRKRHRNNDPADIEGFLGPWGGYIDERRVVKPTQEEAAELEEILAKRNKRGKQV
EEKPLEEKTVLHIKDSVDYQGRSFLHAPQDIGVNLRSDSPPERCFLPKAHIHTWEGHTKG
ISQIRWFPRTAHLLLSCSMDCRVKLWEVYKERRCVRTYYGHRQAVRDVSFDNDGKRFLSA
GYDRYVKLWDTETGACISRFTSRKIPYCAKFNPDPDKQHLFVAGTSDKKIICWDIRSGEI
TQEYDRHLGAVNTITFVDDNRRFVTTSDDKSLRVWEWDIPVDMKYIADPSMHSMPAVTPS
PNQKWLACQSMDNKIVIFSALNRFKMNRKKTFTGHMVAGYACGLDFSPDMSYLVSGDADG
KCYIWDWKTTKLYKKWKAHDGVCIDVLWHPHEPSKLATAGWDGKIKYWD
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgttagccttaaaagattatggtagcagtgatggtgaaagtggttctgaaaatgaaagt
actgttgacaataatgaagacaaaataaaagagtatgataaacatgttaataatgacgat
gatgtttctccaagagattcaattattactactgacaaattgataagttctattggatta
caaatatgttcagcaccagaagttgtatccacaggaacagagttatgcgttaaacacata
gattcaactgcatctatggttacgcataatccaaagtatgaagaattgtttgctccggat
ttaggcccagaaaatccatttaaaactcagcaacaacgagctacaaaaaacatgctttct
ggttacgttgagaaagcgtatatcagtgaatttcaattcgagaatcaaagaaggacattt
acaagttatggatatgctttggatccaaccgttgatggtagcgcagatgaaggaaaaact
ttgatcggtgctaaggaagctgcagaagaatcaggtggtaaaacagtatttgaaagtaca
atgttaaggcctgtggataaaagaaaaagacataggaataatgatcctgcagatatcgaa
ggatttttaggtccttggggtggttacatagatgaaagacgagtggttaaacctactcaa
gaagaggcagcggaattggaagagattttagctaaaagaaataaaagagggaaacaagtg
gaagagaaaccacttgaagaaaaaactgtattacacattaaagatagtgtggattatcaa
ggaagatcattcctacatgcaccacaagatattggtgtcaatttaagatcagattcacca
cctgaacgatgtttcctaccaaaagcacacattcatacatgggaaggtcatacaaagggt
atttctcaaataagatggttcccacgaactgcccacttgcttctttcttgcagtatggat
tgtagggtcaagttatgggaagtttacaaagaaagacgatgcgttagaacttattacggt
catcgtcaagctgtacgtgatgtaagctttgacaatgatggaaaaagatttctttctgct
ggctacgatcgttacgttaaattatgggacacggaaactggcgcttgtataagcagattt
acgagtagaaaaataccatattgcgctaagtttaatcccgatccagacaaacaacatctt
tttgtagctggaacaagcgataaaaaaattatttgttgggatatacgatctggtgagata
actcaagaatatgacagacatttaggtgcagttaatacaataacttttgttgatgataat
cgcagatttgttactacttctgatgataaaagccttcgcgtttgggaatgggatattcct
gttgacatgaaatacattgctgatccttcgatgcattcgatgccagctgtgacaccatcg
cctaatcaaaaatggttagcatgtcaaagcatggacaataaaattgtgatattctcagcc
ttaaacagattcaaaatgaatcggaaaaaaacttttactggtcatatggttgctggttat
gcttgcggtcttgatttttctcctgacatgagttatctagtatcaggagatgctgatgga
aaatgttacatatgggactggaagacaacaaaattatataaaaaatggaaagcgcacgac
ggcgtatgcattgatgttttatggcatccacacgaaccatctaaactagcaacagctgga
tgggatgggaagataaagtattgggattaa
DBGET
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