Pseudomonas corrugata: AXG94_02560
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Entry
AXG94_02560 CDS
T04842
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pcg
Pseudomonas corrugata
Pathway
pcg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AXG94_02560
09124 Replication and repair
03420 Nucleotide excision repair
AXG94_02560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcg03021
]
AXG94_02560
03036 Chromosome and associated proteins [BR:
pcg03036
]
AXG94_02560
03400 DNA repair and recombination proteins [BR:
pcg03400
]
AXG94_02560
Enzymes [BR:
pcg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
AXG94_02560
Transcription machinery [BR:
pcg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AXG94_02560
Chromosome and associated proteins [BR:
pcg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
AXG94_02560
DNA repair and recombination proteins [BR:
pcg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AXG94_02560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
HBB
GP70
Motif
Other DBs
NCBI-ProteinID:
AOE60702
LinkDB
All DBs
Position
complement(626915..629245)
Genome browser
AA seq
776 aa
AA seq
DB search
MTPEPAYSIAVRALCEFTAKTGDLDLRFTPSPTALEGIVGHRTVASRRNITYQAEISLEG
RYRSMRVKGRADGYDPVRNCVEEVKTYRGDLSRQPANHRQLHWAQAKIYGWLMCQKLHLP
RIDVALVYFDIVSEQETCLTQGFEATQLEAFFEEQCALFLAWAEQEMAHRQARNGGAQAL
AFPHAGFRPGQRHLAESVFKAVSTGRCLMAQAPTGIGKTIGTLFPMLKALAPQRLDKVFF
LTAKTPGRKLALDAARVITHSAPSMPLRVLEMVARDKACEHPDKACHGESCPLARGFYER
LPGAREAASRLTLLDQAALREIALAHEVCPYYLSQEMARWADVVVADYNYYFDFSALLFA
LAQADGLTVATLVDEAHNLVERGRQMYSATLDQSTLAAVRKTAPEPLKKSLQRVNRQWNA
LHALQVAAYQAYEKPPEKLLQALSLCTTAIGDYLNDHPQGLDGDLQAFYFEALQFGRVAE
SFNEHFLFDIHKRELGRQRSLSTLCLRNVVPAGFLRPRLTAARSSVLFSATLSPRHYYAD
LLGTPADMVWIDVESPFHAGQLDVQVVSRISTRFAHRQASLEPIVGLMARQFGERPGNYL
AFFSSFDYLQQVVGLFAERHPDIAIWTQSRGMGEASRQAFLERFMEHSQGIGFAVLGGAF
GEGIDLPGSRLIGAFIATLGLAQFNPVNEQIKQRMAAIFGDGYDYTYLYPGLQKVVQAAG
RVIRTQQDRGVVMLIDDRFGEARVQHLLPDWWSVTQEHPAKSCGSEPARDCGVSVT
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgaccccggaaccggcctacagcatcgccgtgcgggcgttgtgtgagttcaccgccaag
accggcgacctggacctgcgctttaccccttcgcccacggcgctggaaggtatcgttggc
caccgcaccgtggcatcacggcgcaatattacgtatcaggcagagatcagcctcgaaggc
cgctaccggagcatgcgggtcaaggggcgagccgacggctacgacccggtccgcaactgc
gtcgaggaggtgaagacctatcgcggcgacctgtccaggcaaccggccaatcatcgccag
ttgcactgggcccaggcgaagatctacggctggctgatgtgccagaaactgcaccttcca
cgcatcgacgtggccctggtgtatttcgacatcgtcagtgaacaggaaacctgcctgacg
caaggcttcgaggcgacgcagctcgaggctttcttcgaagagcagtgcgcattgttcctg
gcctgggccgaacaggagatggctcaccggcaagcgcgcaacggcggtgcgcaggcgctg
gcctttccccatgctggcttcaggccgggacaacggcacctggccgagtcggtgttcaag
gcggtcagcaccggacgctgcctcatggcccaggcgcccaccggcatcggcaagaccatc
ggtacgctgttcccgatgctcaaggccctggcgccgcagcgactggacaaggtgttcttt
ctcacggccaagacgccgggacgcaagctggcgctggatgccgcgcgggtgatcacccat
agcgcaccgtcgatgccgttgcgggtcctggagatggtcgccagggataaagcctgtgag
catccggacaaggcgtgccatggcgaatcctgtccactggcccgtggcttctatgaacgc
ctgcccggcgcccgcgaggccgccagcaggctcaccttgctcgatcaggccgcgttgcgc
gagattgcgctggcccatgaagtgtgcccgtactacctcagccaggaaatggcccgttgg
gccgacgtggtcgtcgccgactacaactattatttcgacttcagcgccttgctgttcgcc
ctggcccaggccgatggcttgaccgtcgcgaccctggttgatgaagcccataacctggtg
gaacgggggcggcagatgtacagcgcgaccctcgaccagtccacattggccgcggtgcgc
aaaaccgcccccgaacccctgaagaaatccttgcagcgggtcaatcgccagtggaacgcc
ttgcacgctcttcaggttgcggcctaccaggcctatgaaaaaccaccggagaaactgctc
caggcactgtccctgtgcaccacggccatcggcgattacctcaatgaccatccccagggc
ctggacggcgacttgcaggcgttctacttcgaggccttgcagttcggtcgggtggcggaa
tcgttcaatgagcatttcctgtttgacatccataagcgtgagctcggtcgtcaacgcagc
ctgtccaccttgtgcttgcgcaatgtggtgccggccggcttcttgcggccaaggctcacg
gcggcccgcagcagcgtgctgttctccgccaccctgagtccacggcactactacgccgac
ctgttgggcacaccggcggatatggtgtggatcgatgtggaatcaccgttccatgccgga
caactggacgttcaggtcgtcagtcggatttccacccgtttcgcccaccgccaggcatcg
ctggaaccgattgtcgggttgatggcgcgccagttcggcgaacgtcccggcaactacctg
gcctttttcagtagcttcgattacttgcaacaggtggtcgggctgttcgccgaacggcac
ccggacattgcgatctggacccaatcccggggcatgggcgaagcgtcccggcaggccttt
ctcgaacggttcatggagcacagccagggcatcggcttcgcggtgctgggcggtgcgttc
ggcgagggaatcgacttgccgggctcgcggctgatcggcgcgtttatcgccaccctgggg
ctggcgcagttcaatccggtcaacgaacagatcaagcagcgcatggccgcgattttcggc
gacggctatgactacacctacctgtaccccggcttgcagaaagtcgtccaggccgccggg
cgcgtcatccgcacccaacaggaccgtggggtggtgatgctgatcgacgaccggttcggc
gaagcccgggtgcagcacttattgccggattggtggtctgtcactcaagaacatcctgct
aaatcctgtgggagcgagcctgctcgcgattgcggcgtttcagtcacttag
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