Pseudomonas corrugata: AXG94_04725
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Entry
AXG94_04725 CDS
T04842
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pcg
Pseudomonas corrugata
Brite
KEGG Orthology (KO) [BR:
pcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcg03032
]
AXG94_04725
03400 DNA repair and recombination proteins [BR:
pcg03400
]
AXG94_04725
Enzymes [BR:
pcg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AXG94_04725
DNA replication proteins [BR:
pcg03032
]
Prokaryotic type
DNA Topoisomerases
AXG94_04725
DNA repair and recombination proteins [BR:
pcg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AXG94_04725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AOE61106
UniProt:
A0A8B6UK33
LinkDB
All DBs
Position
1261854..1262909
Genome browser
AA seq
351 aa
AA seq
DB search
MPDTSPPEALPADLHYVDDTSPGITRKKLRGKFCYFDPQGQRITDAAQIQRINALAVPPA
YTDVWICTDPLGHLQATGRDARGRKQYRYHARWREVRDADKYSRMLEFGRTLPRLRKRLE
TILATPGFSRDKVMATVITLLDVTLIRVGNSQYARENRSYGLTTLRSKHVEINGSAIAFQ
FRGKSGVEHQITVKDRRLARIIKRCQEMPGQNLFQYLDENGERHAISSSDINAYLKTLTG
AEFTAKDYRTWAGSAAALAGLRTLRWETETEAKKHVAEMVRQVARQLGNTPTVCRKCYIH
PAVLEGFLLGTLKQLPKPRARKGLSEEEVGLAMFLQRVTQATQACESKSGA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacacctcgccgcctgaagcattgccggccgatctgcattatgtcgatgacacc
agccccggcatcacccgcaagaagctgcggggcaagttctgttatttcgaccctcagggc
caacgcatcaccgacgcggcgcagatccagcgcatcaatgccttggcggtgccgccggcc
tataccgatgtgtggatatgcaccgacccgctgggacatctccaggccaccggccgggat
gcccgtggacgcaagcaataccgttaccacgcgcgctggcgcgaggtgcgcgatgccgac
aagtattcgcgaatgctcgaattcggtcgcaccctgccccgcttgcgcaaacgcctggag
acgatcctcgcgacacccggtttcagtcgcgacaaagtcatggccaccgtcatcaccctg
ctggacgtgaccctgatccgcgtcggcaacagccaatatgcccgggagaatcgctcttac
ggcttgaccaccctgcgcagcaagcatgtcgagatcaacggcagcgccatcgccttccag
ttccgtggcaagagcggcgtcgagcaccagatcaccgtgaaggaccggcgcctggcgcgg
atcatcaagcgctgccaggaaatgccggggcagaatctgttccagtacctggacgaaaac
ggtgaacgccacgccatcagttcctcggacatcaatgcctacctcaagaccctgaccggc
gccgagttcaccgccaaggattaccgcacctgggccggcagcgcggcggccctggcaggt
ctgcggacgctgcgctgggaaaccgagacggaggcgaaaaaacacgtcgccgagatggtc
aggcaggtcgcccggcagttgggcaacacgccaaccgtctgtcgcaagtgctacattcat
ccggcggtgctggaaggcttcctgctcggaacgctgaaacagctacccaagcccagggcc
cgcaaaggcctcagcgaagaggaagtcgggctggcgatgttcttgcagcgggtgacacaa
gccacgcaagcgtgcgagtcaaagtcaggcgcctga
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