Pseudomonas corrugata: AXG94_08560
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Entry
AXG94_08560 CDS
T04842
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
pcg
Pseudomonas corrugata
Brite
KEGG Orthology (KO) [BR:
pcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcg03400
]
AXG94_08560
DNA repair and recombination proteins [BR:
pcg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
AXG94_08560
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Gene cluster
GFIT
Motif
Pfam:
Vsr
Cullin_Nedd8
Motif
Other DBs
NCBI-ProteinID:
AOE65285
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All DBs
Position
complement(2042839..2043330)
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AA seq
163 aa
AA seq
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MVDIVDVATRSRMMSGIQSKNTKPEILIRRALHSRGFRFRLHAKHLPGKPDLVLPKYKAI
VFVHGCFWHGHTCRYFKIPQTRPDFWLEKIGKNQMRDQAHEASLLALGWRVLVIWECAVR
SMKREKSFLLIDLMAEWLINGNEYLQIDESACSTTALVTTSKG
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
ttggtcgatattgtagatgtggcgacacgttctcgaatgatgtctggaattcagagcaaa
aataccaaaccggagattttaatccgtagagccttgcattcgcgaggttttcgcttccgt
ttgcacgctaaacatcttcccggaaagcccgatctggtcttacccaaatacaaggcaatt
gtgtttgtgcacggctgcttctggcatggacacacctgtcgatatttcaagatcccacaa
acgcgacctgatttttggttggaaaaaatcggcaaaaatcagatgcgagaccaagcccac
gaagcgtccttgctggctctggggtggagggtgcttgtcatttgggagtgtgctgtgagg
tcaatgaaacgggaaaaatcctttttattgattgacctcatggcggagtggctgataaac
ggtaacgaatatttacagatagatgaaagcgcatgttcaacgaccgcattagtgactact
tcgaaggggtag
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