Pseudomonas corrugata: AXG94_12270
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Entry
AXG94_12270 CDS
T04842
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pcg
Pseudomonas corrugata
Pathway
pcg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pcg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AXG94_12270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcg03021
]
AXG94_12270
03400 DNA repair and recombination proteins [BR:
pcg03400
]
AXG94_12270
Enzymes [BR:
pcg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AXG94_12270
Transcription machinery [BR:
pcg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AXG94_12270
DNA repair and recombination proteins [BR:
pcg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AXG94_12270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
AOE62505
UniProt:
A0A7Y5Z887
LinkDB
All DBs
Position
complement(2861585..2862586)
Genome browser
AA seq
333 aa
AA seq
DB search
MQISVNEFLTPRHIDVQVVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE
IDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTLSKKGSGVVTAADIQLDHD
VEIVNPDHVIANLASNGALNMKLTVARGRGYEPADSRQSDEDESRSIGRLQLDSSFSPVR
RIAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQQQLAAFVDLKGDSEPV
VVEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttcggtaaatgagttcctgacaccccgccatattgatgtgcaggttgtcagt
ccaacccgcgccaagatcactctcgagcctctcgagcgtggtttcggccacaccctgggc
aacgcgctgcgccgcatcctgttgtcctcaatgcccggctgtgcagtagtcgaggccgag
attgacggtgtactccacgagtacagcgccatcgaaggcgtacaggaagatgtcattgaa
atcctgttgaaccttaaaggtctggctatcaagctgcacggtcgtgacgaagttacgctg
accttgtcgaagaagggttcgggggtggttaccgctgccgatattcagctggatcatgat
gtcgagatcgttaatcccgatcacgtaatcgctaacctggcgtctaacggcgccctgaac
atgaagctcaccgtagctcgtggtcgtggttatgaaccggcagactcgcgtcagagcgat
gaagacgaaagccgcagcatcggtcgcttgcagcttgactcttcgttcagcccggttcgc
cgtatcgcatacgtggtggaaaacgcccgtgtcgagcagcgtaccaacctggacaagctg
gttattgatctggaaaccaacggtaccctggatcctgaagaggctatccgccgcgctgca
accatcctgcaacagcagttggctgcgttcgtcgacctcaagggtgacagtgagccagtg
gttgtcgagcaggaagacgagatcgatccgatcctgcttcgcccggttgacgatctggaa
ctgactgtacgttcggctaactgccttaaggcggaaaacatctactacatcggcgacctg
attcagcgcaccgaagtagagctgttgaagactccgaaccttggcaagaaatccttgact
gaaatcaaggacgttctggcctcccgcggtctgtccctcggcatgcgcctcgacaactgg
ccgcctgcaagtcttaagaaggacgacaaggcgactgcctga
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