Pseudomonas corrugata: AXG94_13740
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Entry
AXG94_13740 CDS
T04842
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pcg
Pseudomonas corrugata
Pathway
pcg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AXG94_13740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcg03400
]
AXG94_13740
Enzymes [BR:
pcg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AXG94_13740
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AXG94_13740
DNA repair and recombination proteins [BR:
pcg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AXG94_13740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AOE62776
UniProt:
A0A3M3EWZ7
LinkDB
All DBs
Position
complement(3177515..3178327)
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AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGIAPHLEGQRVSRVIVRDRRLRWPIPEDLDVRLSGQRIVQVERRAKYL
LINAEVGTLISHLGMSGNLRLVEVGMPAARHEHVDIELESGLALRYTDPRRFGAMLWSLD
PFNHELLVRLGPEPLTDLFDGERLFQLSRGRSMAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRRAAGGISRARYLKLAIEIKRILAHAIERGGTTLRDFIGGDGQPGYFQQELFVYGR
GGELCKVCGTGLREVRLGQRASVWCPRCQS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactgccggaagtcgaaaccacccgccgcggaattgcgccacatcttgaaggg
cagcgggtcagccgtgtgatcgtgcgcgaccgccgcctgcgctggccgattccggaagac
ctcgatgtgcggctttcgggccagcgcatcgtgcaggtggagcgacgagccaagtacttg
ctgatcaatgccgaggtcggcaccttgatcagccacttgggcatgtccggcaacctgcgg
ctggtggaggtgggcatgcctgctgccaggcacgagcatgtagacatcgagctggagtct
ggccttgccttgcgctacaccgacccgcgacgctttggcgcgatgctctggagcctcgac
ccgttcaaccatgaattgctggttcgcctcggaccggaaccgctgaccgatctgtttgac
ggtgagcgcctgttccagctctcacgtgggcgctccatggcagtcaagcctttcatcatg
gacaacgcggtggtcgtgggggtgggcaatatctatgcgactgaagcgctgttcgccgcc
ggcatcgacccgcgtcgggcggccggaggcatttcccgggcccggtacctgaaactggcc
atcgagatcaaacgcatcctcgcccatgccatcgagcgcggcggtaccacgttgcgggat
ttcattggtggcgacggccagcccggctatttccagcaggaactgttcgtgtacggcagg
ggcggggagttgtgcaaagtctgtggcacgggcttgcgggaagttcgtctggggcagcgt
gcgagtgtctggtgtccgcgttgccaaagctga
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