Pseudomonas corrugata: AXG94_14055
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Entry
AXG94_14055 CDS
T04842
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pcg
Pseudomonas corrugata
Pathway
pcg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXG94_14055 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcg03021
]
AXG94_14055 (rho)
03019 Messenger RNA biogenesis [BR:
pcg03019
]
AXG94_14055 (rho)
Transcription machinery [BR:
pcg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AXG94_14055 (rho)
Messenger RNA biogenesis [BR:
pcg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AXG94_14055 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
AAA_22
S1CSD-TOTE-2
NACHT
Spore_III_AA
AAA
Motif
Other DBs
NCBI-ProteinID:
AOE62834
UniProt:
A0A3M3EYV6
LinkDB
All DBs
Position
complement(3243423..3244682)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKQKPITELLELAEQMGIENMARSRKQDVIFSLLKKHAKSGEEISGDGVLEILQD
GFGFLRSADASYLAGPDDIYVSPSQIRRFNLRTGDTIVGKIRPPKEGERYFALLKVDTIN
FDRPENAKNKILFENLTPLFPTVRMKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP
KAGKTIMLQNIAANIARNNPEVHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNMELPLDRRIAEKRVFPAINI
NRSGTRREELLTADDELQRMWILRKLLHPMDEVAAIEFLVDKLKTTKTNDEFFLSMKRK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgactgaactcaagcaaaagccgattaccgaactgctcgaattggccgaacag
atgggcatagaaaatatggcccgttcgcgcaagcaggacgtgattttctccctgctcaag
aagcacgcgaagagcggcgaggaaatctccggtgatggcgtgctggagattctccaggac
ggcttcggcttcctccgttccgcggacgcttcctacctcgccggcccggacgatatctac
gtctcgccgagccagatccgtcgcttcaacttgcgcaccggtgacaccatcgttggcaag
atccgccctccgaaggaaggcgagcgttacttcgcgctgctcaaggtcgacacgatcaac
ttcgatcgtccggaaaacgcgaagaacaagattcttttcgaaaacctgaccccgctgttc
ccgactgtgcgcatgaagatggaagccggcaacggctccactgaagacctcaccggtcgt
gtcatcgacctgtgcgcacctatcggcaaaggccagcgtggcctgatcgtggcgccgccg
aaagcgggcaagacgatcatgctgcagaacatcgcggccaacatcgcccgcaacaatcct
gaagttcatctgatcgtgctgctgatcgacgagcgtccggaagaagtgacggagatgcaa
cgtaccgtacgcggcgaagtggtcgcctcgacgttcgacgagccgccgacccgtcacgtg
caggttgccgaaatggtgatcgaaaaggccaagcgtctggtcgagcacaagaaggacgta
gtcatcctgctggactccattacccgcctggcccgtgcctacaacaccgtgatcccgagc
tccggcaaggtgctgaccggtggtgtcgatgcccacgccctggagaagccgaagcgtttc
ttcggtgccgcgcgcaacatcgaagaaggcggctcgctgaccatcatcgccaccgcactg
gttgaaaccggttcgaagatggacgaagtgatctacgaggaattcaagggcaccggcaac
atggagctgcccctggaccgtcgcatcgccgagaaacgcgtgttcccggccatcaacatc
aaccgttcgggcactcgtcgtgaagagctgctgacggccgatgacgagttgcagcgcatg
tggatcctgcgcaagctgctgcatccgatggatgaagtggctgccatcgagttcctggtc
gataaattgaagacgaccaagaccaacgatgagttcttcctgtcgatgaagcgcaagtaa
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