Pseudomonas corrugata: AXG94_14795
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Entry
AXG94_14795 CDS
T04842
Name
(GenBank) type IV secretion protein Rhs
Organism
pcg
Pseudomonas corrugata
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RES
RHS
PAAR_motif
TEN_YD-shell
Motif
Other DBs
NCBI-ProteinID:
AOE62974
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All DBs
Position
3410276..3414712
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AA seq
1478 aa
AA seq
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MSDALWAARLGDALDHTSMMADILGGVLEVAANIAITAVATAAVVAATGITVATGGLGCF
LLGAVVGAVVGLAMSKTGADKGLSNLCEGIGNALFPPTVQANILTGSTDTLTNNIPAARA
AGAIESHVAPAGTELEAPEPSYLDMAESFFSQMWRPTVATPAPGAVPKPLDMITCLKHPP
MPPQFLAEGSDKVTINGQPAVRSGDRSTCEAKVVSSGLISPDVTIGGGTVVVREIRSGKT
PGVGLAVTALLMLKGGKGKFLSNLPCMLIGGAASMAVSSAMGAAANAAMGSSNPVHAATG
AKVLGDVEELDFVLPGILPIDWQRFYNSRDERRDGLFGAGWSVAYEIRVEILPHPEGGET
LVYTDEQGRRIDMGSIPLGGAVFSAGEGLSVRRHANGQLLIESADGLYRLFEPAPGNAAL
LRLSQLGDRNDNRIYLDYDEAGRLVRLRDTFDQVQVELAYDEHQPKRVSRIDRLYPDQRN
EVLMHYDYDAQGELAQVRQSNSQVKRRYAYDFGQRMVEHQLPTGLRCFYEWALVEGLEWR
VVRHWTDAGDTYTFDYDLAGGITRITDGLNRVSTRRWDARYQITEAIDALNRTWAFEWND
ESQLLGATDPNGGQHQFSYDEAGNLCQTLDPLGRSESTLWLEHWALPLAETDAAGNTWQY
RYDARGNRIRETDPLGHVTRYRHDAHGQVVEVIDASGKSKTMRWTALGQLSEHTDCSGYT
TRLSYDERGLLLSSSDALGERTRFSYDDQGRLLNKQLPDGRIEHYQRDASGQLIGYSDPA
GHTTSFQHTPSGQLRLRTDAHGRRVELSYDSYGRLLALTNENGESYRFAWDAGDRLSAQH
SLDGSLKRYAYDALDNVTRVQAFAVPGSTDLDLSPQAPVIHELERDAMGRLVAKVTADGR
TEYRYDALDQVKAITFTGLAGEQQSIGFSYDALGQLITEQSWAGRLTHRYDELGNLTQTQ
LPDGRWLNRLHYGSGHLHQINLDGQVISDFERDRLHREVLRTQGSLSTRSEYDRSGRLRA
RQRRQREQSTLLPPAAQSLFAYDGSDQLVERFDNQPEAPHRQLLHYDATGRILASQDNLK
GQREGFAYDPAANLLDGLVGSGHVTHNRVLTYQDKRYRYDGFGRMVEKRSSRRGVQRFKY
DAEQRLVEVHNDNGSVVKMTYDPLGRRIEKTEYDRHATPLGRTRFTWDALQLLQEHRDSQ
TSLYIYADDGHEPLARVDGLGEQQKVRYYHNDFNGQPEQLSESDGHTLWRAHYQVWGNTA
EELREPYYIEEQNLRFQGQYLDRETGLHYNTLRFYDPDIGRFTTPDPIGLAGGLNLYQYA
PNPVSWIDPLGLMKCTTPPKGRKVNRTVYRFEEPGRISTTWTAHKWNVAARHRYTAPGLG
GVYGANSRKTAMGEVNHWGVDLSTRVLVSKKVQLNNVLDLTRADVRKQLGVSLKSITGNK
YTQTHQIGAWAKANGYDGILAPSARNPTGSNLISFAGF
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgcgctctgggctgcacggctgggcgacgcgctggatcacacctcgatgatg
gccgacatcctcggcggggtgctggaggtggcggccaacatcgcgatcacggccgtcgcc
accgctgccgtggtcgcggccaccggtatcactgtcgcgaccggcggcctgggctgcttc
ctgctcggcgccgtggtcggtgcggtcgtcggcctcgccatgagcaagaccggcgccgac
aagggcctgagcaatctctgcgagggcatcggcaacgccctctttccgcccacggtgcag
gcgaacatcctcaccggttccaccgacaccctgaccaacaacattcccgccgcccgcgcc
gccggggccatcgagtcccatgtcgcgccggccggcaccgagctggaagcgcccgaaccc
agctacctggacatggccgaaagtttcttctcgcagatgtggcgccccaccgtcgccacg
cccgccccaggcgccgtgcccaagccgctggacatgatcacctgcctgaagcatccgccg
atgccgccgcagttcctggctgaaggctcggataaggtcaccatcaacggccagcccgcc
gtgcgcagcggcgaccgcagtacctgcgaagccaaggtagtgtcgtccggactgatttcc
ccggacgtgaccattggcggcggcactgtggtggtgcgcgagatccgcagtggcaagacg
ccgggcgtgggtttggcggtgaccgcgttgctgatgctcaagggcggcaagggcaagttc
ctgagcaacctgccgtgcatgttgataggcggcgcggcctcgatggcggtcagcagcgcg
atgggcgcggcggccaacgcggccatgggctcatcgaacccggtgcatgcggcgaccggc
gccaaagtgttgggggatgtcgaggaactggacttcgtcttgcccggcatcctgcccatc
gactggcagcgtttctacaacagccgcgacgaacgccgtgacggcctgttcggtgccggc
tggagcgtcgcctacgaaatacgcgtagagatcctgccccatcccgagggcggcgaaacc
ctggtctataccgacgaacagggccggcgcatcgacatgggctcgatccccctgggcggc
gcggtgttcagtgccggcgaaggcctctccgtgcggcgccatgccaacgggcaattgctg
atcgaaagcgcggacggcctgtatcgtctgttcgaaccggcaccggggaacgcggcgttg
ctgcgcctcagccaactgggcgaccgcaacgacaaccgtatctacctcgactacgacgaa
gccggacgcctggtgcggctgcgcgacaccttcgatcaggttcaggtcgaattggcctac
gacgagcaccagccaaaacgggtcagccggatcgaccgcctctaccctgaccagcgcaac
gaagtgctgatgcactacgactacgatgcccagggagagctggcgcaggtgcgccagtcc
aacagccaggtcaaacgtcgttatgcctacgacttcgggcagcggatggtggagcatcag
ttgcccacggggctgcggtgcttctacgaatgggcgttggtcgaaggcctggaatggcgt
gtggtccgccattggaccgacgccggcgatacctacacattcgactatgacctggccggc
ggcatcacccgcatcaccgacggcttgaatcgcgtcagcacccggcgctgggatgcgcgc
taccagatcaccgaagccatcgatgcactgaatcgcacctgggcattcgagtggaacgac
gaaagccagttgctgggggcgactgaccccaacggtgggcagcatcagttcagctatgac
gaagccggcaatctttgccaaaccctcgacccgctcggccgcagcgagtcgacgctgtgg
ctcgaacactgggccctgcctctggccgaaaccgatgccgcgggcaatacctggcagtac
cgctatgacgcgcgtggcaatcgcattcgcgaaaccgacccgctgggccacgtcacccgc
tatcgccacgacgcccacggccaagtggtggaagtcatcgatgccagcggcaaaagcaag
accatgcgctggacggccctgggtcaactcagcgaacacaccgactgctccggctacacc
acccggttgagctacgacgagcgcggtctgttactcagcagtagcgatgcgctgggggaa
cgcacgcgcttcagttacgacgaccagggccgcttgctgaacaagcagctgccggacggt
cgcatcgaacactatcaacgcgatgccagcggccagttgatcggctacagcgatcccgcc
ggccacaccacgtctttccaacacacgccgagcggtcaactgcgcctgcgcaccgatgcc
catggccggcgggtggagttgagctacgacagttatgggcggcttctggccctgaccaac
gagaacggcgaaagctatcggtttgcctgggatgcgggcgaccgcttgagcgcccagcac
agtctggatggcagcctcaagcgctacgcctacgatgcactggacaacgtcactcgcgtg
caggccttcgccgttcccggcagcaccgacctggacctctcgccgcaagcgcccgtcatc
catgagctggaacgcgatgccatgggtcggttggtcgccaaggtcaccgccgatggtcga
accgaataccgctatgatgccctcgaccaggtcaaggccatcaccttcaccggcctggcc
ggcgaacagcaaagcattggcttcagctacgatgcgcttgggcaactgatcaccgaacag
agctgggccggtcgcctcacgcatcgctatgacgaactgggcaacctcacccagactcag
ctccccgatggccgctggctgaaccgcctgcactacggcagcggtcatttgcaccagatc
aacctcgacggccaggtcatcagtgacttcgagcgcgaccgcctgcaccgcgaagtgctg
cgcacccagggcagtctcagcacccgtagcgaatacgaccgcagcggccgcctgcgggcc
cgccagcgacggcaacgggagcagtcgaccttgttgccgccagcggcgcagtcgttgttt
gcctacgacggtagcgatcagttggtggagcgcttcgacaaccagcccgaagcgccccat
cgtcaactgctgcactacgacgccaccggccgcatcctcgccagccaggacaatctcaag
gggcagcgtgaaggtttcgcctacgacccggccgccaacctgctcgacggactggtgggc
tccggccacgtcacccataaccgcgtgctgacctatcaggacaagcgctaccgctacgac
ggcttcggccgcatggtggaaaaacgcagcagccgacgcggtgtccagcgcttcaagtac
gacgccgaacagcggttggtggaggtgcacaacgacaacggctcggtcgtgaagatgacc
tacgacccgctgggccgacgcatcgaaaaaaccgagtacgatcgccatgctaccccgctt
ggtcgtactcgctttacctgggatgcgctgcaactgttgcaggaacaccgcgacagccag
accagcctctacatctatgccgacgacggccacgagcctttggcgcgggtcgatggcctt
ggtgagcagcagaaggtccgttactaccacaacgacttcaacggccagcccgaacaactt
tcggaaagcgacggccatacgctctggcgcgcccattaccaagtgtggggcaacaccgcc
gaagagctgcgcgaaccgtattacatcgaagagcagaacctgcggttccagggccagtac
ctggaccgcgaaaccgggctgcactacaacaccctgcgcttctacgacccggacataggc
cgtttcaccacgccggaccccatcggccttgccggggggctgaacctctaccagtacgca
ccgaacccggtgagctggatcgaccccctggggctgatgaaatgcaccaccccgccgaag
gggcgcaaggtcaatcggacggtctatcggttcgaagagcccggacggatcagcaccacc
tggaccgcccacaagtggaacgttgccgcccggcatcgttataccgcgccggggcttggt
ggcgtttatggcgccaactcgcgcaagaccgccatgggcgaggtcaatcactggggcgtg
gacctgtccacgcgggtactggtgagcaagaaggtgcagctcaacaacgtcctcgatctg
acacgggccgatgtgcgcaaacaactgggcgtatcccttaaaagcatcaccggcaacaaa
tacacccagacccaccagattggcgcctgggccaaagccaacggttatgatgggatcctg
gcgccgtcggcgcgaaacccgaccggcagcaacttgatctcctttgcaggtttttga
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integrated database retrieval system