Pseudomonas corrugata: AXG94_16125
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Entry
AXG94_16125 CDS
T04842
Symbol
gabD
Name
(GenBank) NAD-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pcg
Pseudomonas corrugata
Pathway
pcg00250
Alanine, aspartate and glutamate metabolism
pcg00310
Lysine degradation
pcg00350
Tyrosine metabolism
pcg00650
Butanoate metabolism
pcg00760
Nicotinate and nicotinamide metabolism
pcg01100
Metabolic pathways
pcg01120
Microbial metabolism in diverse environments
Module
pcg_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pcg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
AXG94_16125 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
AXG94_16125 (gabD)
00310 Lysine degradation
AXG94_16125 (gabD)
00350 Tyrosine metabolism
AXG94_16125 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
AXG94_16125 (gabD)
Enzymes [BR:
pcg01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
AXG94_16125 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
AXG94_16125 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
AXG94_16125 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AOE63222
UniProt:
A0A7Y5Z9U7
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All DBs
Position
3709944..3711386
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AA seq
480 aa
AA seq
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MQLKDTQLFRQQAFIDGAWVDADNGQTIKVTNPATGEVLGTVPKMGAAETRRAIEAADKA
LPAWRALTAKERANKLRRWYELLIENQDDLGRLMTLEQGKPLAEAKGEIVYAASFIEWFA
EEAKRIYGDVIPGHQPDKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVIK
PASQTPFSALALVELAHRAGIPQGVLSVVTGSAGDIGGELTSNPIVRKLSFTGSTEIGRQ
LMAECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRLYIQDS
VYDAFAEKLKAAVAKLKIGNGLEDGTTTGPLIDEKAVAKVQEHIADAVGKGATVLAGGKP
MQGNFFEPTILTNVPKTAAVAKEETFGPLAPLFRFKDEAEVIAMSNDTEFGLASYFYARD
LGRVFRVAEALEYGMVGVNTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCLGI
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttaaagacacccagttgttccgccagcaagccttcatcgatggcgcttgggtc
gatgcggacaatggtcagacgatcaaggtcaccaacccggccacgggcgaagtgttgggt
accgtgccgaaaatgggcgctgccgaaacccgccgtgcgatcgaagccgccgacaaggcg
ctgccggcctggcgtgcgttgaccgccaaggagcgcgccaacaagctgcgccgctggtat
gaattgctgatcgaaaaccaggacgacctcggtcgcctgatgaccctggagcagggcaag
ccactggccgaagccaagggcgagatcgtctatgctgcgtcgttcattgagtggttcgcc
gaagaagccaagcgcatctacggtgacgtgattcccggccaccagcccgacaagcgcctg
atcgtgatcaaacagccgatcggcgtgaccgccgccattaccccgtggaacttcccggcc
gcgatgatcacccgcaaggccggtccagccctggccgccggttgcaccatggtcatcaag
ccggcctcgcaaaccccgttctcggccctggccctggtggaactggcgcaccgtgccggc
atcccgcaaggcgtgctgagcgtggtcaccggcagcgccggcgacatcggcggcgagctg
accagcaacccgatcgtgcgcaagctgtccttcaccggttcgaccgagatcggtcgtcaa
ctgatggccgaatgtgccaaggacatcaagaaagtctccctggaactgggcggcaacgcg
ccgttcatcgtgttcgacgacgcggacctggataaggccgtcgaaggcgcgatcatttcc
aagtaccgcaacaacggccagacctgcgtctgtgccaaccgtctgtacatccaggattcg
gtgtacgacgcgttcgcggagaaactcaaggctgcggtcgccaagctcaagattggcaac
ggtctggaggacggcaccaccaccggtccgctgatcgacgagaaagccgtcgccaaggtc
caggaacacatcgccgatgccgtcggcaaaggcgcgaccgtgctggccggtggcaaaccg
atgcaaggcaacttcttcgagccgaccatcctgaccaacgtcccgaaaaccgctgctgta
gccaaggaagagaccttcggcccgctggcgccgctgttccgcttcaaagacgaagccgaa
gtgatcgcgatgtccaacgacaccgagttcggcctggcctcgtacttctatgcccgtgac
ctgggccgtgtgttccgcgtggctgaagccctggaatacggcatggtcggcgtcaacacc
ggtttgatttccaacgaagtcgcgccgttcggcggcatcaaggcctcgggcctgggccgt
gaaggctccaagtacggcatcgaggactacctggaaatcaaatacctctgcctgggtatc
tga
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