Pseudomonas corrugata: AXG94_19800
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Entry
AXG94_19800 CDS
T04842
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
pcg
Pseudomonas corrugata
Pathway
pcg02020
Two-component system
pcg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pcg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AXG94_19800
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AXG94_19800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcg03021
]
AXG94_19800
Transcription machinery [BR:
pcg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AXG94_19800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
RRP4_S1
DUF4741
HTH_IclR
HTH_21
Motif
Other DBs
NCBI-ProteinID:
AOE63904
LinkDB
All DBs
Position
complement(4574155..4575651)
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AA seq
498 aa
AA seq
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MKPSLVLRMGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALESNPMLERQEEGDDFDNTD
PLADNVEQKPNTETQEPSYQEEAAPTVDNLEDGEWNERIPNDLPVDTAWEDVYQTSASSL
PSSDDDEWDFTTRTSAGESLQSHLLWQLNLAPMSDTDRLIAVTLIDCINNQGYLDETLEE
ILEAFDPELDIELDEIEAVLHRIQQFEPAGIGARNLGECLLLQLRQLSAKTPWLAEAKRL
VTDYIDLLGGRDYSQLMRRMKLKEDELRQVIELVQSLNPRPGSQIEATEPEYVVPDVIVR
KHNDRWLVELNQESVPKLRVNAQYAGFVKRADTSADNTFMRNQLQEARWFIKSLQSRNET
LMKVATQIVEHQRGFLDYGDEAMKPLVLHDIAEAVGMHESTISRVTTQKFMHTPRGIYEL
KYFFSSHVSTSEGGECSSTAIRAIIKKLVAAENQKKPLSDSKIAGLLEAQGIQVARRTVA
KYRESLGIAPSSERKRLM
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccatcgctagtcttgagaatgggccagcagctgacgatgacaccgcagctgcaa
caggccatccgcctgctccaattgtcgaccctggacctgcaacaggaaatccaagaggcc
ctggaatccaatccgatgctcgaacgccaggaagaaggcgacgacttcgacaacactgat
ccgctggccgacaacgtcgagcagaaacccaataccgagacccaggaaccgtcctaccag
gaggaagccgccccgacggtggacaacctcgaggatggcgaatggaacgaacgcatcccc
aacgacctgcccgtggacacggcctgggaagacgtctaccagaccagcgccagcagcctg
ccgagcagcgatgatgacgagtgggacttcaccacccgcacctccgccggtgaaagcctg
caaagccacctgctgtggcaactgaacctggcaccgatgtccgacaccgatcgcctgatc
gccgtgaccctgatcgactgcatcaacaaccagggctacctggacgaaaccctcgaagaa
attctcgaagccttcgatccggagctggacatcgagctggacgagatcgaggccgtcctg
caccgtatccagcagttcgagccggccggcatcggcgcccgcaacctgggtgagtgcctg
ctcctgcaactgcgccagttgtccgccaagacgccatggctggccgaagccaagcgactg
gtcaccgactatatcgatctgctgggcggccgcgactacagccaactgatgcgacgcatg
aagctcaaggaagatgaactgcgccaggtgatcgaactggtccagagcctcaacccgcgc
ccgggctcccagatcgaggccaccgagcccgagtacgtggttcccgatgtgatcgtgcgc
aagcacaacgatcgctggctggtggagctgaaccaggagtcggtacccaagctgcgggtc
aacgcccagtatgccggctttgtaaagcgtgccgacaccagcgccgacaacaccttcatg
cgcaaccagctgcaggaagcgcgctggttcatcaagagcctgcagagtcgcaacgaaacc
ctgatgaaggtcgccacccagatcgtcgagcaccaacgcggcttcctggactacggcgac
gaagcgatgaaaccgctggtccttcacgacattgccgaggcagtgggcatgcacgaatcg
acaatttcccgtgtgaccacgcagaaattcatgcataccccacggggtatctacgaattg
aaatattttttctccagccacgtcagcacctccgaaggcggcgaatgctcttccacggcc
atccgcgcgatcatcaagaaactggtggccgcggaaaatcagaaaaagccgttgagtgac
agcaagatcgctggtttactggaggcacaaggcattcaggtggcccgccgtaccgtcgcc
aagtatcgcgaatccctcgggatcgcgccttcgagcgaacgcaagcggttgatgtaa
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