Pseudomonas corrugata: AXG94_21255
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Entry
AXG94_21255 CDS
T04842
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pcg
Pseudomonas corrugata
Pathway
pcg03030
DNA replication
pcg03430
Mismatch repair
pcg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AXG94_21255
03430 Mismatch repair
AXG94_21255
03440 Homologous recombination
AXG94_21255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcg03032
]
AXG94_21255
03400 DNA repair and recombination proteins [BR:
pcg03400
]
AXG94_21255
Enzymes [BR:
pcg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AXG94_21255
DNA replication proteins [BR:
pcg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AXG94_21255
DNA repair and recombination proteins [BR:
pcg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AXG94_21255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
AOE64177
LinkDB
All DBs
Position
4887734..4891255
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRIKPLVKTLVGMNMPAVAVTDQNNMCSLVKFYKTAMGGG
IKPICGADLWLSSKDPDAPLSRISLLVMNAVGYRNLTELISRGFIDGQRNGSIIIEREWV
AEASEGLIMLSAAKEGEIGLALLSGNADEAETLARDWMDVFPDRFYIEVQRTNRPNDEEH
LHAAVALADKIGAPLVATNDVRFIKQEDFEAHETRVCIGEGRALDDPRRPKNYSDQQYLK
SAEEMAELFSDLPEALENTVEIAKRCNIEVKLGKHFLPNFPIPDGMTIDEYFRKVSFDGL
EERLSVLLPKDTTQDYEAKRQVYIDRLNFELDIIIQMGFPGYFLIVMDFIQWAKNNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDYV
AEKYGRNAVSQIITFGSMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFIKVDEEAAEIWEMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEEGDGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVGEEPLDIAFIPLDDKPTYS
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHPDYQYDGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCANNGIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNASEFKFTVNDEGRIIYGLGAI
KGVGEGPVEAITEARQDGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPYFHDEP
KAYQANIDRNRAVLLAAMEEAIKAAEQTARTHDSGHADLFGGLFVEEDADVYGNHRKAKE
LTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRVM
KNKKGDKMGFITLDDRSGRIEASLFADAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
VKRVMSMEDARTNLAESLRLKLQTQDLKGDQLRWLGELFKRHRGACPITMEYVRPDAKAV
LQFGEGWRIDPADALIQALRDQFGKDNVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttcattcgttcatctacgcctgcacactgaatactccctggtcgacggtctg
gtgcggatcaaaccactggtcaagaccctggtgggcatgaacatgcctgccgtggcggtc
accgaccagaacaacatgtgttcgctggtcaagttctacaagaccgccatgggcggtgga
atcaagccgatctgcggagccgacctgtggctgtccagcaaggatccggacgcaccgttg
agccgtatcagcctgctggtcatgaacgccgtgggttaccgcaatctgactgagttgatc
tcccgcggctttatcgatggccagcgcaacggttcgatcatcatcgagcgcgagtgggtg
gccgaggccagcgaaggcctgatcatgctgtcggcggccaaggagggtgaaatcggccta
gccctgctcagcggcaacgccgacgaagccgagaccctggctcgggactggatggacgtg
ttcccggaccgcttctacatcgaagtacagcgcaccaaccgtcccaacgacgaagagcac
ctgcacgctgcagtggcgctggccgacaagatcggcgcgccgctggtggcgaccaacgac
gtgcgcttcatcaagcaggaagatttcgaagcccacgaaacccgcgtctgcatcggtgag
ggccgggctctcgatgacccgcgccggcccaagaactacagcgatcagcaatacctcaaa
agcgccgaggagatggccgagttgttcagcgatctgcccgaggcgctggaaaacaccgtc
gagatcgccaagcgctgcaacatcgaagtgaagctgggcaagcacttcctgcccaacttc
ccgattcccgatggcatgaccatcgacgagtatttccgtaaagtgtcgttcgacggcctg
gaggagcgcctcagcgtcctgctgcccaaggacaccactcaagactacgaagccaagcgc
caggtctacatcgaccggttgaattttgagctggatatcatcatccagatgggcttcccc
ggttacttcctgatcgtgatggactttatccagtgggccaagaacaacggcgtgccggta
gggcccggtcgtggatcgggtgccgggtcgctggtggcttatgtacagaagatcaccgac
ctcgatccgctggaatatgacctgctgttcgaacgtttcctcaacccggaacgggtttcc
atgcccgacttcgacgtcgacttctgcatggatggtcgtgaccgggtaatcgattacgtg
gccgagaagtatggccgcaacgcggtgagccagatcatcaccttcggttccatggccgcc
aaggcggtggtgcgtgacgtggcccgggtacagggtaagtcctatggcctggcggatcgt
ctgtcgaagatgattccgttcgaagtcggcatgaccctggaaaaagcctacgaacaggaa
gaaattctgcgggacttcatcaaggtcgatgaagaggcggcggaaatctgggagatggcc
cgcaagctcgaaggcgtggtgcgtaacgtcggcaagcatgctggtggcgtggtgatcgcg
ccaaccaagctgaccgacttctcgccgatctattgcgacgaagagggcgacggcctggta
acccagttcgacaaggatgacgtcgaggcggcgggcctggtgaagttcgacttcctgggg
ctgcgtaccctgaccatcatcgattgggcgctcaagaccatcaaccgcgaccgggccaag
gtcggcgaggagccgctggacatcgcgttcattcctctggacgacaaaccgacctacagc
ctgctgcagaaagcggaaaccacggcggtgttccagcttgaatcccgcggcatgaaggag
ctgatcaagaagctcaagcccgactgcctggaagacttgatcgcactggtggccctgttc
cgtccgggcccgctgcaatcgggtatggtggacgacttcatcaaccgtaaacacggtcgc
gccgagctggcgtacccgcacccggattaccagtacgacggcctcaagccggtactggcg
ccgacctacggcatcatcctgtatcaggaacaggtgatgcagattgcccaggtcatggcc
ggctacaccctcggcggcgcggacatgctgcgtcgggcaatgggtaagaaaaagcccgag
gagatggccaagcagcgcggcggtttcatcgagggttgtgcgaacaacggtatcgatgcg
gacctggccggtaacatcttcgacctggtggaaaaattcgccggctacggcttcaacaaa
tcccactctgccgcctacggcctggtgtcttaccagaccgcgtggctgaaggcgcattac
ccggcaccgttcatggccgccgtactgtcggcggatatgcacaacaccgacaaggtcgtg
accctgatcgaagaagtgcggaccatgaagctgcgcctcgacgcgccggacgtgaacgct
tcggagttcaagttcacggtgaacgacgaggggcgcatcatttatggcctgggcgcgatc
aagggcgtgggcgaggggccggtggaggccatcaccgaggcgcgccaggatgggccgttc
aaggatttgttcgatttctgtgcccgggtcgacctcaagcgtatcaacaagcgcaccctc
gacggtttgatccgcagtggcgcgctggaccggttgggtccttatttccatgacgagccc
aaggcctaccaggccaacatcgaccgcaaccgcgcggtgctgctggcggccatggaagaa
gcgatcaaggctgccgaacagaccgcccgcacccatgacagcggccacgcggacctgttt
ggcggcctgttcgtcgaggaagatgccgatgtctacggcaaccatcgcaaggccaaggaa
ctgaccctcaaggaacgcctcaaaggcgagaaagacacccttgggctgtacctcaccggt
cacccgatcgatgaatacgaaggcgaaatccgccgcttcgcccgtcagcgcatcatcgac
ctgaagccggctcgcgatacgcaaaccgtcgccgggatgatcatcgccctgcgggtgatg
aagaacaaaaaaggcgacaaaatgggtttcatcaccctcgacgaccgttccgggcgcatc
gaggcatcgttgtttgccgatgcgttccactcggcgcagtctttgttgcagaccgacgcg
atggtggtggtggaaggcgaggtcagcaacgatgacttctccggtggcctgcggctgcgg
gtcaagcgggtgatgagcatggaggatgcccggaccaacctggccgagagcctgcgcctg
aagttgcagactcaggacctcaagggcgaccagctacgctggctgggcgagttgttcaag
cgccatcgcggtgcctgtccgatcaccatggagtatgtgcgccccgacgccaaggccgtg
ctgcagttcggcgagggctggcggatcgatccggcggatgcgttgattcaagccttgcgt
gaccagttcggcaaagacaacgtcttcctccaataccgttga
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integrated database retrieval system
