Pseudomonas corrugata: AXG94_22235
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Entry
AXG94_22235 CDS
T04842
Name
(GenBank) RNA polymerase-binding ATPase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pcg
Pseudomonas corrugata
Brite
KEGG Orthology (KO) [BR:
pcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcg03021
]
AXG94_22235
Transcription machinery [BR:
pcg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
AXG94_22235
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AOE64363
UniProt:
A0A3M3EGB0
LinkDB
All DBs
Position
complement(5084628..5087474)
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AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGDTRQYALRNAPLTRVRFSPG
DVITHFEGWKMTVREVDDVDGLLVYHGLNGQNEVVTLPETQLSNFIQFRLASDRLFAGQI
DPLAWFSLRYHTLEHTSRQLQSPLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDEERFIESDA
SNPFEDTQLALVALEWLVDDEKAQDALFAAGWDLMVVDEAHHLVWHEDQVSPQYALVEQL
AETIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLKAFRAESENYRPVAEAVQELLDK
GRLSPEAHKTIHGFLGNEGEALLTAVNDGDVEASARLVRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHAYPLPCPDEYLELPLGDHAELYPEVSFQAQPDASEEERWWKFDPRVEWLIDQ
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVLFDLPSHPDLLEQRIGRLDRIGQKHTIELHVPYLETSP
QERLYQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLEEADDGQWQALIDEARAERERLE
TELHTGRDRLLELNSGGAGEGDALVEAILEQDDQFALPIYMETLFDAFGIDSEDHSDNAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDSNGNDLAARVSF
ETLNDQLESVPRASANKFIQAQRDQLTPRINAGEEKIAPRHAERVAEAQRRLAADTDEEL
ARLTALQAVNPTVRDSELVALRKQREQGLAMLEKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagtgacagcgaagccgagctgggt
ttaggcaccgttctggcacaggacggccgcttgttgaccgtgctctacccggccactggc
gatactcgccagtacgcgctacggaatgcgcctcttacacgtgtacggttttcgccgggc
gacgtgatcactcacttcgaaggttggaaaatgaccgtgcgcgaagtcgatgatgtcgac
gggctgctggtctatcacggccttaacggacagaacgaagtcgtcaccctgccggaaacc
cagctgtcgaacttcatccagttccgcctggccagcgaccgtctgttcgccggccagatc
gacccgctggcctggttctccctgcgctatcacaccctggaacacaccagccgccaattg
cagtccccgctctggggcctgggtggcgttcgggcccagcccatcgcccaccagttgcac
atcgcccgggaagtggccgaccgcattgcacccagggtattgctggcggacgaagtgggg
ttgggcaagaccatcgaggccggtctggtcattcatcgccagctgctgtccgggcgcgcc
agccgcgtactgatactggtcccggaaaaccttcagcaccagtggctggtggaaatgcgc
cggcgcttcaacctgcaagtcgccctgttcgatgaggaacgcttcatcgaaagcgatgcg
agcaacccgttcgaagatacgcaactggcgctggtggcgctggaatggctggtggacgac
gagaaggcccaggacgcgctgttcgccgccggctgggacctgatggtggtcgacgaagcc
catcacctggtgtggcacgaggatcaggtcagtccgcaatacgcgctggtcgaacagctt
gccgagacgatccccggcgtattgctgctgaccgcgacgccggaacagttgggccaggac
agccacttcgcccgcctgcgcctgctggacccgaaccgcttccatgacctcaaggccttc
cgcgccgaaagcgaaaattaccgccccgtggccgaggctgtgcaagagctgctggacaag
ggccgcctctcgcccgaagcccacaagaccatccacggtttcctgggcaacgaaggcgaa
gcgctgctgaccgccgtcaacgatggcgacgtcgaagccagcgcccgcctggtccgcgaa
ttgctggaccgtcacggcaccggccgtgtgctgtttcgcaatacccgggccgccgtacag
ggcttcccggagcgtaaactgcacgcttatccgctgccgtgcccggacgaatacctcgag
ctgccgctgggcgatcacgccgagctgtacccggaagtcagcttccaggcccaaccggat
gccagcgaagaagaacgctggtggaaattcgacccacgcgtcgagtggctgatcgaccaa
ctgaaaatgctcaagcgcaccaaggtactggtgatctgtgcccatgccgaaaccgccatg
gacctggaagatgccttgcgcgtgcgctccggcatcccggccacggtattccacgaaggc
atgaacatcctcgagcgcgaccgtgccgccgcgtacttcgccgacgaagagtttggcgcg
caagtgctgatctgctcggaaatcggcagtgaaggacgcaacttccagttcgctcatcac
ctggtgctgttcgacctgccttctcacccggacctgctggaacagcgaatcggccggctg
gaccggatcggccagaagcacaccatcgagttgcacgtgccgtacctggaaaccagcccg
caagagcggctgtaccagtggtaccacgaggcgctgaacgcattcctcaacacctgcccg
accggcaacgccttgcagcatcaattcggcccgcgcctgctgcccttgctggaagaggca
gacgatggccagtggcaagcgctgatcgacgaggcacgcgccgaacgcgagcgtctggag
accgagctgcacaccggtcgcgaccgtttgctggaactcaactcgggcggcgccggtgaa
ggtgacgcactggtggaagccattcttgagcaagacgaccagttcgccctgccaatctac
atggaaaccctgttcgacgcgttcggcatcgacagcgaggaccattcggacaacgcgctg
attctcaagccgagcgaaaaaatgctcgatgccagcttcccgcttggcgacgacgaaggc
gtgaccatcacctacgaccgtaaccaggcgctatcgcgcgaggacatgcagttcatcacc
tgggaacacccgatggtgcaaggcggcatggacctggtgctgtccggctccatgggcaat
acggccgtggcgctgatcaagaacaaggccctcaagcccggcaccgtgctgctggaactg
ctttacgtcagtgaagtggtggccccacgctcgctgcaactgggccgctacctgccaccg
gccgccctgcgctgcctgctggacagcaacggtaacgacctggcggcccgggtttcgttc
gagacattgaacgaccagctcgaaagcgtgcctcgcgccagcgccaacaagttcatccag
gcccagcgtgaccaactcacgccgcgcatcaatgccggtgaagagaagattgccccacgg
cacgccgagcgcgtggccgaggcacaacgtcgcctggccgccgatactgacgaagagctg
gcccgtctgaccgccctgcaagccgtcaatccgaccgtgcgcgacagcgagctggtggcc
ctgcgcaaacagcgcgaacaaggcctggcgatgctggaaaaggctgcgctgcgcctggaa
gcgatccgggtgttggtggcgggctga
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