Pseudomonas chlororaphis PA23: EY04_00410
Help
Entry
EY04_00410 CDS
T03201
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch00250
Alanine, aspartate and glutamate metabolism
pch00310
Lysine degradation
pch00350
Tyrosine metabolism
pch00650
Butanoate metabolism
pch00760
Nicotinate and nicotinamide metabolism
pch01100
Metabolic pathways
pch01120
Microbial metabolism in diverse environments
Module
pch_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
EY04_00410 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
EY04_00410 (gabD)
00310 Lysine degradation
EY04_00410 (gabD)
00350 Tyrosine metabolism
EY04_00410 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
EY04_00410 (gabD)
Enzymes [BR:
pch01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
EY04_00410 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
EY04_00410 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
EY04_00410 (gabD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AIC17379
UniProt:
A0A5M7D366
LinkDB
All DBs
Position
109781..111223
Genome browser
AA seq
480 aa
AA seq
DB search
MQLKDAQLFRQQAFIDGAWVDADNGQTIKVNNPATGEILGTVPKMGAAETRRAIEAADKA
LPAWRALTAKERATKLRRWYELLIENQDDLGRLMTLEQGKPLAEAKGEIAYAASFIEWFA
EEAKRIYGDVIPGHQPDKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVIK
PASQTPFSALALVELAHRAGIPKGVLSVVTGSAGDIGGELTSNPIVRKLSFTGSTEIGRQ
LMAECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRLYIQDS
VYDAFAEKLKAAVAKLKIGNGLEEGTTTGPLIDEKAVAKVQEHIADALGKGATLLAGGKP
MEGNFFEPTILVNVSKDAAVAKEETFGPLAPLFRFKDEAEVIAMSNDTEFGLASYFYARD
LGRVFRVAEALEYGMVGVNTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCLGI
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttaaagacgcccagttgttccgccagcaagccttcatcgatggggcttgggtc
gacgcggataacggccagaccatcaaagtgaacaacccggcaacgggcgaaatcctcggc
accgtgccgaagatgggcgcggctgaaacccgccgtgccatcgaagccgccgacaaggcc
ctgccggcctggcgcgcgctgaccgccaaggagcgggcgaccaagctgcgtcgctggtat
gagctgctgatcgaaaaccaggacgacctcggtcgcctgatgaccctggagcagggcaag
ccactggccgaagccaagggcgaaatcgcctacgccgcctccttcatcgaatggttcgcc
gaagaagccaagcgcatctacggcgacgtgattcccggccaccagccggacaagcgcctg
atcgtgatcaagcagccgatcggtgtgaccgcggccatcaccccgtggaacttcccggcg
gcgatgatcacccgtaaagccggcccggccctggccgctggctgcaccatggtgatcaag
ccggcttcgcagaccccgttctccgccctggccctggtcgagctggcgcaccgcgccggc
atcccgaaaggcgtgctcagcgtggtcaccggcagcgccggcgacatcggcggcgagctg
accagcaacccgatcgtgcgcaagctgtccttcaccggctcgaccgaaatcggtcgccag
ctgatggccgaatgcgccaaggacatcaagaaagtctccctggagctgggcggcaacgct
ccgttcatcgtgttcgacgacgcggacctggataaggccgtcgaaggcgcgatcatctcc
aagtaccgcaacaacggccagacctgcgtctgcgccaaccgcctgtacatccaggattcg
gtctacgacgccttcgccgagaagctcaaggccgcggtggccaagctgaagatcggcaac
ggcctggaagaaggcaccaccaccggtcctttgatcgacgaaaaagccgtggccaaggtc
caggaacacatcgccgacgccctgggcaaaggcgcgaccctgctggccggcggcaagccg
atggaaggcaacttcttcgagccgaccatcctggtcaacgtgtcgaaagacgcggccgtg
gccaaggaagaaaccttcggtccgctggcgccgctgttccgtttcaaggacgaagccgaa
gtgatcgccatgtccaacgacaccgagttcggcctggcctcgtacttctacgctcgcgac
ctgggccgtgtgttccgtgtggccgaagccctggaatacggcatggtcggcgtcaacacc
gggttgatctccaacgaagtcgcgccgttcggcggcatcaaggcctcgggcctgggccgt
gaaggctccaagtacggcatcgaggattacctggaaatcaaatacctctgcctgggcatc
tga
DBGET
integrated database retrieval system
