Pseudomonas chlororaphis PA23: EY04_03095
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Entry
EY04_03095 CDS
T03201
Name
(GenBank) DeoR faimly transcriptional regulator
KO
K21021
diguanylate cyclase [EC:
2.7.7.65
]
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
EY04_03095
Enzymes [BR:
pch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
EY04_03095
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GFIT
Motif
Pfam:
GGDEF
CHASE8
HAMP
DUF7801
sCache_3_2
Cadherin_C_2
Motif
Other DBs
NCBI-ProteinID:
AIC17895
UniProt:
A0AAQ1JGS5
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All DBs
Position
728425..729693
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AA seq
422 aa
AA seq
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MSLFKSPVRPTLRSVIGRGHLIVALLAISMASLSLTLLGVLALRVYADHNLHLIARSINY
TVEAAVVFNDSAAATEALALIASTEEVAEAQVLDARGRVLAHWERPETGLLSDLQMQIAR
AFLEKPITVPIMYQGQEIGSVALTGHGGSLLRFLLSGLVGIVLCIAVSAWVALYLARRQL
RGITGPLRSLADVAHAARRERAFDVRVPPAKIAELDNLGNDFNALLDELEAWQTHLQSEN
ETLAHQASHDSLTGLPNRAFFEGRLIRALRSASKLNERVAVLFLDSDRFKGINDNFGHAA
GDAVLMAVASRVRAQLREEDLVARLGGDEFAILLTPLHRIEDAERIAEKIIASMELPIAL
PGSTSVLTSLSIGIAVYPDHGTTPGALLNAADAAMYQAKRVSRGGQHTAGSEPPVVHVQS
RS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcttcaaatcgcctgttcgccctaccttgcgttcggtcattggccgtgggcat
ctgattgtcgccctgctggccatttccatggccagcctgtccctgaccctgctcggggtg
ttggcattgcgggtgtatgccgatcacaacctgcacctgatcgcgcgttcgatcaactac
acggtcgaagcggcggtggtgttcaacgacagcgccgcggcgaccgaagccctggctctg
atcgcctccaccgaagaagtggccgaggcccaggtgctcgatgcccggggccgggtgctg
gcccactgggagcgtccggaaaccggtttgctgagcgacctgcaaatgcagatcgcccgc
gcctttctcgagaagcccatcacggtgccgatcatgtatcagggccaggagatcggcagt
gttgccttgaccgggcacggcggcagcctgttgcgttttctgctcagtgggttggtgggg
attgtcctgtgcatcgcggtgagcgcctgggtggcgctgtacctggcgcgccgccagttg
cgcggcattaccgggccgctgcgcagcctggccgatgtggcccatgccgcgcgccgcgag
cgggcattcgacgtgcgggtaccgccggcgaagattgccgagctggacaacctgggcaac
gacttcaatgccttgctcgatgagctggaggcctggcaaacccatttgcagagtgaaaac
gaaaccctggcccaccaggccagccacgacagcctgaccgggttgccgaaccgggcgttt
ttcgagggccggctgatccgcgcgctacgcagcgccagcaagctcaacgaacgggtcgcg
gtgctatttctcgacagcgaccgcttcaagggcatcaacgacaacttcggtcacgccgcc
ggcgatgcggtgctgatggcggtggcatcgcgggtgcgggcgcagttgcgcgaggaagac
ctggtggcgcgcctggggggcgacgagttcgccattctgctgaccccgctgcaccgcatc
gaggacgccgagcgtatcgccgaaaaaatcatcgccagcatggagctgccgatcgccttg
ccaggcagtacttcggtgctgacgtcgctcagtatcgggattgccgtctaccctgatcat
ggcaccaccccgggtgctctgctcaacgccgccgatgcggcgatgtatcaggccaagcgt
gtctctcgaggcgggcaacacaccgcggggtcggagccccccgtcgttcacgttcaatcc
aggagctaa
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