Pseudomonas chlororaphis PA23: EY04_05975
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Entry
EY04_05975 CDS
T03201
Name
(GenBank) diguanylate phosphodiesterase
Organism
pch
Pseudomonas chlororaphis PA23
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
MHYT
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
AIC18453
UniProt:
A0A7S5HLD9
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Position
complement(1341742..1344030)
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AA seq
762 aa
AA seq
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MEWLGLHFFTELPEGGQVLLTCNHNPVLVILAYLVACAGSFATLDMAERVRHVDLAAAQQ
RWRWVGAFCLAGGIWAMHFIGMLALQIPIETHYDLPMTLLSLLIAVIASWLAMKTLSHPK
LQLWRYLLASIWIGLGICAMHYVGMAAMRSPATAYYQPDLFGLSIAIAISASLVALLLSR
YLSNGSGVLHQLLKYAASLLLGGGIVAMHFTGMWALKLVLPATGTPSIAVDDNPLQLGLT
IAVIALLIIGSSISAALADKKLQHKEQDLRRVNTLLSQLDQARVALQQVAHYDSLTNLIN
RRGFNQLFAEKLIEKTVQGGMLAVMFLDIDHFKRINDSLGHDAGDELLKVIAGHIKSSTR
SHQDVVARFGGDEFCILMSLSDRDEAQHMAQRIMSRMKEPIELAGRRMVMTTSIGISVFP
DDGKTSEELLKHADLALYQSKGSGRNSLHFFSTNLKTKASLELQLEEELRNALRNEAGLT
LYYQPIYDLGSRKVSKLEALVRWRHPLHGLLAPDRFIGIAEANGLIAELDNWVLRKACED
LAALSRHGFAELKIAVNCSALNLAREELAEEIANALGSAGVAPQRLELEVTENALMGNID
STVALLRQIRNLGVSLSIDDFGTGYSSLAYLKRLPLNTLKIDRSFIQDVPQSTQDKEIVQ
AIIVMAHTLHLQVVTEGVESVQQYEFLAQYGCDFIQGYLLSRAIPLEELPGVIDEIEQRM
RPAVAAVSPLAPVRDTGGPGSRDPAPDSPGRHAGASVVQPIR
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggaatggcttggtctgcatttttttaccgagctccccgaaggcgggcaggtattactc
acctgcaaccacaaccccgtgctggtgatcctcgcctatctggtggcctgcgccggcagc
ttcgccaccctggacatggccgaacgggtgcgccacgtcgacctggcggcggcccagcaa
cgctggcgttgggtcggcgccttctgcctggcgggcggcatctgggccatgcacttcatc
ggcatgctggcactgcagatccccatcgaaacccattacgacctgcccatgaccttgctg
tcgctgctgatcgcggtgattgcatcctggctggcgatgaagaccctcagccatcccaag
ttgcagctatggcgctacctgctggcgtcgatctggatcggcctgggcatctgcgccatg
cactatgtcggcatggcggccatgcgctcgccagccacggcctactaccagcccgacctg
ttcggcctgtcgattgccatcgccatcagcgcgagcctggtcgccctgctcttgtcccgc
tacctgagcaacggcagcggcgtgctccaccagttgctcaaatacgcggccagcctgctg
ctggggggcggcatagtcgccatgcatttcaccggcatgtgggcgttgaaactggtgctg
ccggcgacgggcacaccctccatcgcggtggacgacaaccccttgcaactgggcctgacc
atcgccgtcatcgccctgttgatcattggcagcagcatcagcgcggccttggcggacaag
aaactccagcacaaggaacaggacctgcgccgggtcaacaccctgctgagccaactggac
caggcccgggtggcgctgcaacaggtggcgcactacgactccctgaccaacctgatcaat
cgtcgcggcttcaaccagctgttcgccgaaaagctcattgaaaagaccgtgcagggcggc
atgctcgcggtgatgttcctcgacatcgatcacttcaagcggatcaacgacagcctcggc
cacgatgccggcgacgaactgttgaaggtgattgccggccatatcaaaagctccacccgc
agccatcaagacgtagtggcgcgtttcggcggagacgagttctgcatcctcatgagcttg
agcgaccgcgacgaagcccagcacatggcgcaacgcatcatgagcaggatgaaggaaccc
atcgagctggcaggaaggcgcatggtgatgaccaccagcatcggcatcagcgtctttccc
gacgacggcaagaccagcgaagagctgctcaagcatgccgacctggcgctctatcaatcc
aagggcagcggtcgcaacagcctgcatttcttcagcaccaacctgaagaccaaggcgagc
ctggaactgcaactggaggaagaactgcgcaatgccctgcgcaacgaagccggcttgacc
ctgtattaccagcccatctacgacctgggcagccgcaaggtcagcaagcttgaagcgctg
gtgcgctggcggcatccgttgcacgggctgctggccccggatcgcttcatcgggatcgcc
gaagccaacgggctaattgccgaactggacaactgggtcctgcgcaaggcctgcgaggac
ctggccgccctgtcccgccacggctttgccgagctgaaaatcgcggtgaactgctcggcc
ctgaacctggcccgggaggagttggccgaagagatcgccaacgccctgggcagcgccggt
gtcgcgccccagcgcctggaactggaagtcacggaaaacgccctgatgggcaacatcgac
agcaccgtggccctgttgcggcagattcgcaatctcggggtgtcgctgtcgatcgatgac
ttcggcaccggttactcgtccctcgcctacctcaagcgcctgccgctcaacaccctgaag
atcgaccgttcgttcatccaggacgtgccccagtcgacccaggacaaagagatcgtccag
gcgatcatcgtcatggcccataccctgcacttgcaggtggtgaccgaaggcgtcgagagc
gtgcagcagtacgagttcctcgcccaatacggctgcgacttcatccagggttacctgctc
agccgcgcaatacccctggaagagttgcccggggtgatcgacgagatcgagcagcgcatg
cggcctgccgtcgccgcggtcagccctctggcgccggttcgcgatacaggcggaccaggg
tcgcgggatcctgctccagatagccctggccgccatgcaggcgcatcagttgtgcagcca
atccgctga
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