Pseudomonas chlororaphis PA23: EY04_07350
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Entry
EY04_07350 CDS
T03201
Name
(GenBank) ABC transporter
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EY04_07350
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pch02000
]
EY04_07350
02044 Secretion system [BR:
pch02044
]
EY04_07350
Transporters [BR:
pch02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
EY04_07350
Secretion system [BR:
pch02044
]
Type I secretion system
Adhesin protein transporter
EY04_07350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
Peptidase_C39
AAA_33
AAA_29
RTX
Motif
Other DBs
NCBI-ProteinID:
AIC18713
LinkDB
All DBs
Position
complement(1641972..1644131)
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AA seq
719 aa
AA seq
DB search
MTSMEPGSSGVDPRLSFDDPLLDGLLILCKLHDCTVSRASLSAGLPLAQQRLSLDLLPRA
AARASLQARLLRRELSAISKLNLPVLLILKHGRCAVLRRWGDDGQALILPSEAEGGEQWV
SQAELNDDYSGQALFARPRHELEELRNSLVPRVEAWFRDTLKLSRWLYSDAILASLLINL
LGLMVPLFVMQTYDRVVPNQATSTLWVLAIGLLIGTGFELVLRVVRAHLLDSAGKRTDVI
LSATLFERITGMAMKAKPATIGGFAQSIHDFQGLREFLTAVTLTSLIDLPFAVLMLLVIG
LLGGWLVVIPLLAFPLTIVFAMLIQARLRDTVQKSLSLGAERQALLIETLGGLETLKACS
AESERQHRWESTHGALTRLDSHARNLSAMATNGTLFIQQFCGMATIVAGVYSIIAGNLSV
GALVATYMLGSRVLAPLGQIAGLITRYQQAQLTMRSTDALMALPQERDARQRPLERTQLQ
GALALNQVTFRYQGQNAAALSNISFSMQPGERIGIIGRSGSGKSTLGRLVMGFYAPEEGQ
LLLDGLDLRQLDVADLRQQIGYVAHDLPLLAGSLRDNLTLGARYISDARMLEVAELTGVT
ELARQHPQGFDRPVGERGQLLSGGQRQAVLLARALLLDPPIMLLDEPTSAMDNSSEDALR
QRLHAWVQGKTLLLVTHRTSMLSLVDRLVVLDNGRIVADGPKEAVIDALRKGRVGSAAV
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtgaccagcatggaacccgggagctcaggcgtcgatccgcgcctgagctttgatgacccg
ttgttggacggattgctgatcctctgcaaactgcatgactgcaccgtcagccgtgccagc
ctcagcgcggggctgcccctggcccagcaacgcctgagcctggacctgctgccccgcgcc
gcggcccgcgccagcctgcaggcgcgcctgctgcgccgcgagctgtcggcgatttccaag
ctcaacctgccggtgctgctgatcctcaagcatggccgctgcgcggtcctgcgccgctgg
ggcgatgacggccaggcgctgatcctgcccagcgaagccgagggcggcgaacagtgggtc
agccaggcggagctgaacgacgactacagtggccaggcgctgttcgcccggccacgccat
gaactggaagaactgcgcaattccctggtgccgcgggtcgaagcctggttccgcgacacc
ctgaaactctcgcgctggctgtacagcgacgcgatcctcgccagcctgttgatcaacctg
ctggggctgatggtgccgctgttcgtcatgcagacctacgaccgcgtggtgcccaaccag
gccacctcgaccctctgggtgctggctattggtctgttgatcggcaccggcttcgagctg
gtgctgcgggtggtgcgcgcccatctgctggacagcgccggcaagcgcaccgacgtgatc
ctctccgccaccctgttcgagcgcatcaccggcatggcgatgaaagccaagccggcgacc
atcggcggcttcgcccagagcatccatgacttccagggcctgcgcgagtttctcaccgcc
gtgaccctgaccagcctgatcgacctgcccttcgccgtcctgatgctgctggtgatcggc
ctgctcggcggctggctggtggtgattccgctgctggcgtttcccctgaccatcgtcttc
gccatgctgatccaggcccgcctgcgcgacaccgtgcaaaaaagcctgagcctgggcgcc
gaacgccaggcgctgctgatcgagaccctcggcggcctggaaaccctcaaggcctgcagc
gccgaaagcgaacgccagcaccgctgggaaagcacccacggcgccctcacccgcctcgac
agccacgcgcgcaatctctcggccatggccaccaacggcaccctgttcatccagcagttc
tgcggcatggcgaccatagtcgccggggtctacagcatcatcgccggcaacctcagcgtc
ggcgcgctggtggccacctacatgctcggcagccgggtcctggcgccgctggggcagatc
gccgggctgatcacccgctaccagcaggcgcaactgaccatgcgcagcaccgacgccctg
atggccctgccccaggaacgcgatgcccgccagcgcccgctggaacgcacgcaactgcaa
ggcgcgctggcgctcaatcaggtgaccttccgttatcaggggcagaatgccgcggccctg
agcaacatcagcttcagcatgcagcccggcgagcgcatcggcatcatcggccgcagcggc
tccggcaagagcaccctggggcggctggtcatgggtttctatgcccccgaggaaggccag
ttgctgctggacggcctcgacctgcgccagctcgacgtggccgacctgcgccagcagatc
ggctatgtcgcccacgacctgccgctgctggccggcagcctgcgcgacaacctgaccctc
ggcgcccgctacatcagcgatgcgcgcatgctcgaggtcgccgagctgaccggagtcacc
gagctggcccgccagcatccccagggcttcgaccggccggtgggcgagcgtggccaactg
ctgtccggcggccagcgccaggcggtgctgctggcccgagcgctgctgctggacccgccg
atcatgctcttggacgaacccaccagcgccatggacaacagcagcgaagacgccctgcgc
cagcgcctgcacgcctgggtacagggcaagaccctgctgctggtgacccaccgcacctcg
atgctcagcctggtggaccggctggtggtcctggacaacgggcggatcgtcgccgacggg
ccgaaagaagcggtcatcgatgcactgcgcaagggccgtgtcggctctgcggcggtctag
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