Pseudomonas chlororaphis PA23: EY04_08295
Help
Entry
EY04_08295 CDS
T03201
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch00061
Fatty acid biosynthesis
pch00071
Fatty acid degradation
pch01100
Metabolic pathways
pch01212
Fatty acid metabolism
pch02024
Quorum sensing
pch04146
Peroxisome
Module
pch_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
EY04_08295
00071 Fatty acid degradation
EY04_08295
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
EY04_08295
09145 Cellular community - prokaryotes
02024 Quorum sensing
EY04_08295
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pch01004
]
EY04_08295
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pch04147
]
EY04_08295
Enzymes [BR:
pch01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
EY04_08295
Lipid biosynthesis proteins [BR:
pch01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
EY04_08295
Exosome [BR:
pch04147
]
Exosomal proteins
Exosomal proteins of breast milk
EY04_08295
Exosomal proteins of breast cancer cells
EY04_08295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AIC18898
LinkDB
All DBs
Position
1845577..1847244
Genome browser
AA seq
555 aa
AA seq
DB search
MSAAFRLPLEVFYEREARHPRQRFLVQPLGGGRVEELTWADVGHQARCAAHWLRARELPP
GSHVAIISKNCAHWIIADLAIWMAGHVSVPLYPNLTADSVAQVLEHSESALVFIGKLDDW
PAMAPGVKPGLPTISLPICPEGRFDFTWDQLQQCSPIQDDPNPAAEQLATIIYTSGTTGL
PKGVMHSFGTLGFAATRGTQLFGLGPTDRLLSYLPLCHVAERMFVELAAIYTGQTVFFAE
SLETFLTDLQRARPTALFGVPRIWTKFQMGVYSKVPAKRLDFLLGLPLIGKRVGHKVLAG
LGLDALRVALSGAAPVPQTLLDWYQRLGLDVLEVYGMTESCGYSHIGRSGQHVPGWIGRP
CPDVEVRIDEAGEVQVRSGATMLGYFKDPQKTAETVTADGFLRTGDKGEQDADGNLRLTG
RLKEIFKTSKGKYVAPAPIENRLAVHSRIEQVCVVGDGLSAPLGLCVLSAAGLQDAAGGA
RGGLHASLENLLDEVNGALDKHERLHRLVVVKDSWAVENGFLTPTLKIKRNVIEATYGER
FKEWSERSEAVLWQD
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgcttttcgtttgccgctggaagtgttctacgagcgcgaagctcgtcatccc
cgccaacgtttcctggtccagcccctgggcggtggccgggtcgaagagctgacctgggcc
gacgtcggccaccaggcccgctgcgccgcccactggctgcgcgcccgcgagctgccgccg
ggcagtcatgtcgcgatcatttccaagaactgcgcccactggatcatcgccgacctggcg
atctggatggccggtcacgtttccgtgccgctgtatcccaacctgaccgccgattcggtg
gcccaggtgctggagcattccgagtcggccctggtgttcatcggcaagctcgatgactgg
ccggcgatggcccccggcgtgaagcccgggctgccgaccatcagcctgccgatctgcccc
gaaggccgctttgacttcacctgggaccagttgcagcagtgctcgccgatccaggacgac
cccaaccccgccgccgagcaactggcgaccatcatttacacctcgggcaccaccggcctg
cccaagggcgtgatgcacagcttcggcactctgggctttgcggcgacccgcggcacccag
ctgttcggtctcgggccgacggaccggctgttgtcctacctgccgctgtgccatgtggcc
gagcgcatgttcgtcgagctggcggcgatctataccgggcagacggtgttcttcgccgag
agcctggagacctttctcaccgacctgcagcgggcgcggcccacggcgctgttcggtgtg
ccgcggatctggaccaagttccagatgggcgtgtacagcaaggttccggccaagcgcctg
gacttcctgctgggcctgccgctcatcggcaagcgggtcgggcacaaggtgctggccggg
ctggggctggatgcactgcgggtcgccttgtccggcgccgcgccggtgccgcagaccctg
ttggactggtaccagcgcctgggcctcgacgtgctggaggtgtacggcatgaccgaaagt
tgcggttattctcacatcggccgcagcggccagcatgtacccggctggatcggtcggcct
tgcccggacgtcgaggtgcggatcgacgaggccggagaggtccaggtgcgcagtggggcg
accatgctcggctacttcaaggacccacagaagaccgcggaaaccgtcaccgcggatggt
ttcctgcgcaccggcgacaagggcgagcaggacgccgatggcaatctgcgcctgaccggg
cggctcaaggaaatcttcaagaccagcaagggcaagtacgtggccccggcgccgatcgag
aaccggctggcggtgcattcgcggatcgagcaggtgtgtgtggtcggcgatggcctgagt
gcgccgctgggcctgtgcgtgttgtccgcggccggtttgcaggacgccgccggcggtgcc
cgtggcggcctgcatgcgagcctggaaaacctgctcgatgaggtcaacggcgcgctcgat
aaacatgaacgcttgcaccgcctggtggtggtgaaggacagttgggcggtggaaaacggc
tttctgaccccgaccctgaagatcaagcgcaatgtcatcgaagccacctacggcgagcgc
ttcaaagagtggagcgagcgctccgaagcggtgctgtggcaggattga
DBGET
integrated database retrieval system
