Pseudomonas chlororaphis PA23: EY04_09350
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Entry
EY04_09350 CDS
T03201
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch00071
Fatty acid degradation
pch00280
Valine, leucine and isoleucine degradation
pch00310
Lysine degradation
pch00362
Benzoate degradation
pch00380
Tryptophan metabolism
pch00410
beta-Alanine metabolism
pch00640
Propanoate metabolism
pch00650
Butanoate metabolism
pch00907
Pinene, camphor and geraniol degradation
pch00930
Caprolactam degradation
pch01100
Metabolic pathways
pch01110
Biosynthesis of secondary metabolites
pch01120
Microbial metabolism in diverse environments
pch01200
Carbon metabolism
pch01212
Fatty acid metabolism
Module
pch_M00087
beta-Oxidation
pch_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
EY04_09350 (fadB)
00650 Butanoate metabolism
EY04_09350 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
EY04_09350 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
EY04_09350 (fadB)
00310 Lysine degradation
EY04_09350 (fadB)
00380 Tryptophan metabolism
EY04_09350 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
EY04_09350 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
EY04_09350 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
EY04_09350 (fadB)
00930 Caprolactam degradation
EY04_09350 (fadB)
Enzymes [BR:
pch01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
EY04_09350 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
EY04_09350 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
EY04_09350 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
EY04_09350 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AIC19100
UniProt:
A0AAP9VZN3
LinkDB
All DBs
Position
2076992..2079139
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNELRSAVDAIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADYRVMSSSAKIGLPEVKLGIYPGFGGTVRLPRIIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVAPEKLHEAALATVKRAISGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAHDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEDQVK
EDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFYAYEADKKGKQ
KKVADPSVLEVLKPIVYEQREVTDEDIVNWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaacaagttcaaccgtcttaccctgaacgaattg
cgttcggccgtagacgccatcaaggcagatgcgtcggtcaagggtgtgatcgtcagcagt
ggcaaggacgtcttcatcgtcggcgccgacatcaccgaatttgtcgacaacttcaagctg
ccggatgcagagcttgtcgcaggcaacctcgaagccaacaagattttcagcgatttcgaa
gacctcaacgttccgaccgttgccgcgatcaatggcatcgcgctgggcggtggtctggaa
atgtgcctggcagctgactatcgcgtcatgtcctccagcgccaagatcggcctgccggaa
gtcaagctgggtatctacccgggcttcggcggtaccgttcgcctgccgcgcatcatcggt
gccgacaacgccatcgaatggattgccgccggcaaggaaaaccgtgccgaggacgcactg
aaagtcggcgccgtcgacgctgtcgtcgccccggaaaaactgcatgaagcggctctggcc
accgtcaagcgcgccatctccggcgagttcgactacaaggccaagcgtcagccgaagctg
gaaaagctcaagctcaacgccatcgaacagatgatgtccttcgaaaccgccaagggtttt
gtcgccggccaggctggcccgaactacccggcgccggtcgaagccatcaagaccattcag
aaagccgccaacttcggtcgtgacaaggcgctggaagtcgaggccgcaggcttcgtcaaa
ctggccaagacctctgctgcgcagagcctgatcggtctgttcctgaatgatcaggagctg
aagaaaaaggccaaggcctatgacgaaatcgcccacgatgtgaagcaggccgccgtactg
ggtgccggcatcatgggtggcggtatcgcctatcagtcggcgtccaaaggcacgccgatc
ctgatgaaagacatcaacgaacacggtatcgagcaaggcctggcggaagccgccaagctg
ctggtcggccgtgtcgataaaggtcgcatgaccgcggcgaagatggccgaggtgctcaac
ggcattcgtcctacgctgtcctacggtgacttcggccacgtcgacctagtggtcgaagcg
gtcgtcgagaaccctaaggtcaagcaagcggttctggccgaagtcgaagaccaggtcaaa
gaggacaccatcctcgcttcgaacacctcgaccatttccatcagcctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtcgaagtcatccgtggcgagaagtccagcgagctggccgtggccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaagctggtcagcgccggtgtggac
ttcgtgcgcatcgacaaggtcatggaaaaattcggctggccgatgggcccggcctacctg
atggacgtggtcggcatcgacaccggccaccacggtcgtgacgtgatggccgaaggtttc
ccggatcgcatgaaagacgatcgccgttcggctatcgatgtgctctacgaagccaagcgt
ctgggccagaagaacggcaagggtttctacgcctacgaggccgacaagaaaggcaagcag
aagaaagtggccgacccgtcggtgctggaagtgctcaagcctatcgtgtacgagcagcgt
gaagtcactgacgaggacatcgtcaactggatgatgatcccgctgtgcctggaaaccgtt
cgttgcctggaagacggcatcgtcgagaccgcggccgaagccgatatgggcctggtgtac
ggtattggtttccctccattccgtggcggtgcgctgcgctacatcgactcgatcggtgtt
gccgagttcgttgccctggccgaccagtacgccgatctgggtgcgctgtaccacccgacc
gcgaagctgcgcgagatggccaagaacggccagagcttcttcggttaa
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