Pseudomonas chlororaphis PA23: EY04_09720
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Entry
EY04_09720 CDS
T03201
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pch
Pseudomonas chlororaphis PA23
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pch03016
]
EY04_09720
Enzymes [BR:
pch01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
EY04_09720
Transfer RNA biogenesis [BR:
pch03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EY04_09720
Prokaryotic type
EY04_09720
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GFIT
Motif
Pfam:
PseudoU_synth_1
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
AIC19167
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Position
2156813..2157637
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AA seq
274 aa
AA seq
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MAAAGFFRIALGVEYKGSRYRGWQRQASGVPSVQETLEKALSRVADSPVLLSCAGRTDAG
VHACGQVVHFDTQAERSMKAWVMGANINLPHDISVSWAKVMPAHFHARFKAIARRYRYVI
YNDQIRPAHLNEEITWNHRPLDVERMAEAAQHLVGTHDFSAFRAGQCQAKSPIKEIHHLR
VTRHGKMIVLDIRASAFLHHMVRNIAGVLMTIGAGERPVEWAREVLKSRIRRTGGVTAHP
FGLYLVQVEYHDEFELPERYIGPHFLTGFSELDG
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcaggctttttcagaatcgcgttgggtgtcgaatacaagggctcgcgttat
cgcggctggcagcgtcaggcttccggtgtcccgagtgtccaggaaaccctcgaaaaggcg
ctgtcccgggtggcggattcgccggtgctgctgtcttgcgccgggcgtaccgacgccggc
gtgcacgcctgcgggcaagtggtgcacttcgatacccaggccgagcgttcgatgaaggcg
tgggtgatgggggccaatatcaacctgccccacgacatcagtgtgagctgggccaaggtc
atgccggcgcattttcatgcgcggttcaaggcaattgcccgccgctatcgctacgtgatc
tacaacgaccagatccgtccggcgcacctgaacgaggagatcacctggaaccaccgccca
ctggatgtcgagcggatggccgaagccgcccagcatctggtgggcacccacgatttcagt
gcgttccgcgccgggcaatgccaggccaagtcgccgatcaaggaaatccaccatctgcgg
gtcacccgccacggcaagatgattgtcctggatatccgcgccagcgcgttcctgcatcac
atggtgcgcaatatcgccggggtgctgatgaccatcggcgcgggcgagcgtccggtcgag
tgggccagggaagttctgaagagccggattcgccgcacgggcggggtgacggcgcatcct
ttcgggctgtatctggtgcaggtcgagtaccacgatgagttcgaattgcccgagcgatac
atcgggccacatttcctcaccggcttctcggaacttgacggctga
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