Pseudomonas chlororaphis PA23: EY04_10620
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Entry
EY04_10620 CDS
T03201
Name
(GenBank) transcriptional regulator
KO
K14414
transcriptional regulatory protein RtcR
Organism
pch
Pseudomonas chlororaphis PA23
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pch03000
]
EY04_10620
Transcription factors [BR:
pch03000
]
Prokaryotic type
Other transcription factors
Others
EY04_10620
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Ortholog
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GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
Mg_chelatase
AAA_16
AAA_22
NACHT
ABC_tran
AAA_30
MCM
AAA_19
AAA_2
AAA_7
BrxC_BrxD
ATPase_2
AAA_14
IstB_IS21
AAA_33
TniB
Motif
Other DBs
NCBI-ProteinID:
AIC19329
LinkDB
All DBs
Position
complement(2342316..2343923)
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AA seq
535 aa
AA seq
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MSGKPTVAIGFVGSTLDRVGKGANRWSHWRPSVGLCQQQDVLINRLELIHGVDARDVSLA
ERVANDIRQVSPETEVRLHPMGLKNPWDFEEVYGALHDFTSAYPFDTEREDYLVHITTGT
HVAQICWFLLTEARYLPARLIQTSPARRRDPEQHATGTHALIDLDLSRYDRIASRFAGKR
LEGLAFLKSGIATRNAAFNRSIEQIERVAVRSKAPMLLIGPTGAGKSFLARRIYELKRGR
HQVQGRFVEVNCATLRGDGAMSALFGHIKGAFTGAQNARDGLLRAADGGMLFLDEIGELG
LDEQAMLLKAIEEKRFFPMGSDKEVDSDFLIIAGTHRDLRGRVAQGLFREDLYARINLWT
FNLPGLAGRREDIEPNIDFELERHAREQGRLVRFNLEARRRYLAFASSSEAAWLGNFREL
SASITRMATLADSGRIDEAQAEEEIERLRYAWGLSQAQDPLATLLGDTAELDLFDRLQLQ
AVLEVCRQADSLSDAGRKLFGVSRQTKAQPNDADRLRKYLARFGLEWKQIVAPAD
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcaagcccacggtcgccataggttttgtcggttccaccctcgatcgcgtcggc
aagggcgccaaccgctggagccactggcgccccagtgtcggcctgtgccagcagcaggac
gtgctgatcaatcgcctggagctgatccatggtgtcgacgcccgggacgtcagcctggcc
gagcgggtggccaacgacattcgccaggtgtcgcccgaaaccgaggtgcgcctgcacccc
atgggcctgaagaacccctgggatttcgaagaggtgtacggcgccctgcacgacttcacc
agcgcctacccgttcgacaccgagcgcgaggactacctggtgcacatcaccaccgggacc
cacgtggcacagatctgctggttcctgctgaccgaggcgcgctacctgccggcgcggctg
atccagacctccccggcgcggcgccgcgacccggagcagcacgccaccggcacccatgcc
ctgatcgacctcgacctgtcgcgctacgaccgcatcgcctcgcgcttcgccggcaagcgc
ctggagggcctggccttcctcaagtccgggatcgccacccgcaacgccgcgttcaaccgc
tccatcgaacagatcgaacgtgtcgctgtgcgctccaaggcgccgatgctgctgatcggc
cccaccggtgccggcaagtcgttcctggcccggcgcatctatgagctcaagcgcggccgg
catcaggtccagggacgttttgtcgaggtcaactgcgccaccctgcgcggcgacggcgcc
atgtcggcgctgttcgggcatatcaaaggcgccttcaccggcgcccagaacgcccgcgac
ggcctgctgcgggcggcggatggcggcatgctgtttctcgacgagattggcgagctgggg
ctcgacgaacaggcgatgctgctcaaggccatcgaggaaaaacgcttcttccccatgggc
tcggacaaggaagtggacagcgacttcctgatcatcgccggtacccaccgcgacctgcgc
ggccgggtcgcccagggcctgttccgcgaggacctgtatgcgcggatcaacctctggacc
ttcaacctgccggggctggccgggcggcgcgaggacatcgagccgaacatcgatttcgaa
ctggaacgccacgcccgggaacaagggcgcctggtgcgcttcaacctcgaggcgcggcgg
cgctacctggcgtttgccagctccagcgaggcggcgtggctgggcaacttccgcgagctg
tcggcgtccatcacccgcatggctaccctggccgacagcgggcgcatcgacgaagcccag
gccgaggaagaaatcgagcggctacgttatgcctggggcttgagccaggcgcaggatccg
ttggccaccctgctgggcgacacggccgaactcgacctgttcgaccgcttgcaattgcag
gcagtgcttgaggtctgccgccaggccgacagcctgtccgatgccggacgcaagctgttt
ggcgtgtcccgccagaccaaggcccagcccaatgacgccgaccgcctgcgcaagtacctg
gcgcgcttcggcctggagtggaagcagatagttgcaccagcggactaa
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