Pseudomonas chlororaphis PA23: EY04_10855
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Entry
EY04_10855 CDS
T03201
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EY04_10855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pch03021
]
EY04_10855
Transcription machinery [BR:
pch03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EY04_10855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
DnaG_DnaB_bind
Motif
Other DBs
NCBI-ProteinID:
AIC19374
LinkDB
All DBs
Position
2392393..2392899
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AA seq
168 aa
AA seq
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MHDDSFASPVARLYANHHGWLRGWLHRRLGHSADAEDLAHDTFVRVMRSQEDVRELRQPM
AFLATIANGLLINRWRRQAIERAYLEALAARPVAEEPSPEERHLMIETLLQLDSLLVGLS
SRVRQIFFLSQLDGLTYPQIAARLSLSVAQVQRAMGKAFSVCYASRFE
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgacagctttgcctcgcccgtcgcccggttgtatgcgaaccatcacggctgg
cttcggggctggttgcatcgacggttggggcacagtgccgatgccgaggacctggctcac
gacacctttgtccgggtgatgcgctcgcaggaggatgtgcgcgagttgcgccagcccatg
gcgtttctcgcgaccattgccaatggtctgctgatcaatcgctggcggcgccaggcgatc
gagcgggcttacctggaagccctggcggcgcgaccggtggccgaggagccttcgccggaa
gagcggcacctgatgatcgaaaccctgttgcagctggattcgctgctggtgggcttgtcg
tcgcgggtgcggcagattttctttttgtcccagctcgacggcttgacctacccgcagatc
gccgcgcggttgagcctgagcgtggcccaggtgcagcgggccatgggcaaggcgttcagt
gtctgttacgcgagccgttttgaatga
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