KEGG   Pseudomonas chlororaphis PA23: EY04_10855
Entry
EY04_10855        CDS       T03201                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pch  Pseudomonas chlororaphis PA23
Pathway
pch02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pch00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    EY04_10855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pch03021]
    EY04_10855
Transcription machinery [BR:pch03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     EY04_10855
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_23 DnaG_DnaB_bind
Other DBs
NCBI-ProteinID: AIC19374
LinkDB
Position
2392393..2392899
AA seq 168 aa
MHDDSFASPVARLYANHHGWLRGWLHRRLGHSADAEDLAHDTFVRVMRSQEDVRELRQPM
AFLATIANGLLINRWRRQAIERAYLEALAARPVAEEPSPEERHLMIETLLQLDSLLVGLS
SRVRQIFFLSQLDGLTYPQIAARLSLSVAQVQRAMGKAFSVCYASRFE
NT seq 507 nt   +upstreamnt  +downstreamnt
atgcacgacgacagctttgcctcgcccgtcgcccggttgtatgcgaaccatcacggctgg
cttcggggctggttgcatcgacggttggggcacagtgccgatgccgaggacctggctcac
gacacctttgtccgggtgatgcgctcgcaggaggatgtgcgcgagttgcgccagcccatg
gcgtttctcgcgaccattgccaatggtctgctgatcaatcgctggcggcgccaggcgatc
gagcgggcttacctggaagccctggcggcgcgaccggtggccgaggagccttcgccggaa
gagcggcacctgatgatcgaaaccctgttgcagctggattcgctgctggtgggcttgtcg
tcgcgggtgcggcagattttctttttgtcccagctcgacggcttgacctacccgcagatc
gccgcgcggttgagcctgagcgtggcccaggtgcagcgggccatgggcaaggcgttcagt
gtctgttacgcgagccgttttgaatga

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