Pseudomonas chlororaphis PA23: EY04_10870
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Entry
EY04_10870 CDS
T03201
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pch
Pseudomonas chlororaphis PA23
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pch03009
]
EY04_10870
Ribosome biogenesis [BR:
pch03009
]
Prokaryotic type
ribosomal protein modification factors
EY04_10870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
AIC19377
LinkDB
All DBs
Position
complement(2396878..2399079)
Genome browser
AA seq
733 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCD
TRNIPTDNIRLSQNNIVDPENRYNQIFKIQVELPADISDKDRQGILRSIDRCTVKKVVQA
GPEFVIEEVENLDADAQALLMPSAGSHSTYIAGKDLPLEQTIANMSGILAGLGMKIEIAS
WRNIVPNVWSLHIRDAQSPMCFTNGKGATKESALASALGEFIERLNCNFFYNDQFWGEEI
ANAPFVHYPDERWFKPGPKDELPSEILDPYCLKIYNRDGELRGSHLFDTNSGNEERGIVS
LPFVRQSDGEVVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKREIIEGEFA
LPDVPAHVLAKYPGILAGIQGLEAQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASFG
AHPSMEVALERSLTELLQGRSFEGLNDLPPPTFEGQAVTEPNNFVEHFIDSSGVVSWRFF
SAQSDYEFVEWDFSGQGEDSNAQEAATLFGILEGMGKESYMAVYEHLGATACRILVPDYS
EIYPVEDLIWDNTNKALFFRSDILNLHSLDEDELQALLERLIESELDDYTDITTLIGIEF
DDNTAWGQLTILELKLLIFLALQQYEEAKECVEMFLQYNDNTAERGLFYQAMNAVLEMEL
DEDLDLADYEVNFRRMFGNERMDAVIGSVNGNVRFYGLTPTSMKLEGIDRHLRLIDSYKK
LHAARAKVTAVSS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaactttctcgacaacctccgacttgaagccaagttcgatgacttc
acggtggtggccgaccagcccatccgctacaagggcgatggctcggcaccgggtccgttc
gactatttcctggcgtcatcggcgttgtgcgcggcgtacttcgtgaagttgtactgcgac
acccgcaatatccccaccgataacattcgcctgtcgcagaacaacattgtcgatccggaa
aaccgctacaaccagatcttcaagatccaggtcgagttgccggcggatatctccgacaag
gaccgccagggcatcctgcgctccatcgaccgttgcaccgtcaagaaagtggtacaggcc
gggcctgagtttgtgattgaagaggtggaaaacctcgacgccgatgcccaggccttgctg
atgccgagcgcgggttcgcacagcacctatatcgccggcaaggacctgccgctggaacag
accatcgccaacatgtccggcatcctggccggcctgggcatgaagatcgagatcgcttcg
tggcgcaatatcgtgcccaacgtctggtcgctgcatatccgcgacgcgcagtcgccgatg
tgcttcaccaatggcaagggcgcgaccaaggaaagcgcgctggcctcggcgctgggtgag
ttcatcgagcgcctgaactgcaacttcttctacaacgatcagttctggggcgaggaaatc
gccaacgcaccgttcgtgcattacccggacgagcgctggttcaagccgggccccaaggat
gagctgcccagcgaaatcctcgacccctactgcctgaaaatctacaaccgcgatggcgaa
ctgcgcggctcgcacctgttcgacaccaattccggcaatgaagagcgcggcattgtttcg
ctgccgttcgtgcgccagtcggacggtgaagtggtgtacttcccgtcgaacctgatcgaa
aacctctacctcagcaacggcatgagcgccggcaacaccctggccgaagcccaggtgcag
tgcctgtcggagatcttcgagcgcgccgtcaaacgcgaaatcatcgaaggcgagttcgcc
ctgccggatgtaccggcgcacgtattggcgaaatacccggggattctcgccggcatccag
ggtctggaagcccagggctttccggtactggtcaaggatgcgtcgctgggcggtgagttc
ccggtgatgtgcgtgaccttgatgaacccgcgtaccggtggcgtatttgcctcgttcggc
gctcaccccagcatggaagtggcgctggagcgcagcctcaccgaactgctgcaaggccgc
agtttcgagggcttgaacgatttgccgccgccgacgttcgaaggccaggcggtcaccgag
ccgaacaacttcgtcgagcacttcatcgactccagcggcgtggtgtcgtggcgcttcttc
agcgcccagtcggattatgaattcgtcgagtgggacttctccggccagggtgaagactct
aatgcccaggaagccgcgaccttgttcggcattctcgaaggcatgggcaaagagtcctac
atggccgtgtacgagcacctgggcgcaaccgcctgccgcatcctggtaccggactactcg
gaaatctacccggtggaagacctgatctgggacaacaccaacaaggcgctgttcttccgc
tccgacatcctcaacctgcacagcctcgacgaggatgagttgcaggcgttgctcgagcgc
ctgatagaaagcgagctggacgactacaccgatatcaccaccctgatcggcatcgagttc
gacgacaacaccgcctggggccaactgaccatcctggagttgaagctgctgatcttcctg
gccttgcagcaatatgaagaagccaaggagtgcgtggagatgttcctgcagtacaacgac
aacaccgccgagcgcggcctgttttaccaggcgatgaatgcggtgctggagatggaactc
gacgaagatctggacctggcggattacgaagtcaatttccgtcgcatgttcggcaacgag
cggatggatgcggtgattggctcggtgaatggcaacgtgcgcttctatggcctgacgccg
accagcatgaagctggaagggatcgaccgtcacctgcgcctgatcgacagctacaagaag
ctgcacgcggcgcgggccaaggtgacggctgtttccagctga
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