Pseudomonas chlororaphis PA23: EY04_11115 Help Entry EY04_11115        CDS       T03201                                  Name (GenBank) biofilm-associated protein   KO K20276   large repetitive protein Organism pch  Pseudomonas chlororaphis PA23 Pathway pch02024   Quorum sensing Brite KEGG Orthology (KO) [BR:pch00001]  09140 Cellular Processes   09145 Cellular community - prokaryotes    02024 Quorum sensing     EY04_11115 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Big_13 Big_6 FG-GAP_3 HemolysinCabind Big_3_5 Big_3_2 FG-GAP bMG3 Motif Other DBs NCBI-ProteinID:  AIC19423 LinkDB All DBs Position 2450375..2459080 Genome browser AA seq 2901 aa AA seqDB search MLPIKIIAKDTGHPLDVTGNNLLTINRPAVIKMSTAAEDIQSVSREGERLVIKLKSGETL SIDGFFEVVDGVKSDLVFEDPKTGELLIADYSVPWTGVSLMPLESIDSLLAVAEVESTGW LAPLLGLAAVGGAVAIASHHGGGGGGGSSSDAANADQGLTTPSTPSVLFNNMHGLTGKAD AGATISLTLADGSVVTTVADDTGLWHFNPNPLADGEQGTLQASLNGVQSAAIGSGVADVT APAEPVVTQNNQDGLAGTAEPGSTITVSLADGSTVIATVGADGQWNVTPNPLTPGVSGSI VVTDAAGNSSASVDTGIINSTQPIPPTVDQNNADGLSGTGEPGSTVTVELPDGSTVTTIV DEDGNWSFVPNPLQPGEEGSVTITDPDGNTSTGVDTGSSDQTPPAAPTVDQNNGDGLNGT GEPGSTVVVELPDGSTVTTVIDENGNWSFVPNPLQPGEEGSITVIDPAGNTSEGVNTGTN DQPPSPAPADQNPPAAPTIDQNNGDGLSGTGEPGSTVVVELPDGSTVTTVIDENGNWSFV PNPLQPGEEGSITVIDSSGNASEGVNTGSSDQTPPAAPTIDQNNEAGLNGTGEPGSTVVV ELPDGSTVTTVIDEDGNWSFVPNPIPEGEQGSITVIDPAGNASEAVNTGSSDQTPPAAPT VDQNNESGISGTGEPGSTVVVELPDGSTVTTVIDEDGNWSFVPNPIPEGEQGSITVIDPA GNASEAVNTGSSDQTPPAAPTVDQNNESGISGTGEPGSTVVVELPDGSTVTTVIDEDGNW SFVPNPIPEGEQGSITVIDPAGNASEAVNTGSSDQTPPAAPTVDQNNASGISGTGEPGST VVVELPDGSTVTTVIDEDGNWSFVPNPIPEGEQGSITVIDPAGNASEAVNTGTSDQTPPA APTIDQNNANGISGTGEPGSTVVVELPDGSTVTTVIDEDGNWSFVPNPVPEGEQGSITVI DPAGNASEAVNTGSSDQTPPVAPTVDQNNGTGLSGTGEAGGIVTVELADGSTVTTVINED GHWSFEPNPLQPGEAGSITVTDIAGNISEATQTAPSDQTAPVIEESSLDLVDNVGTITGT IARGDVTDDAQPEFTGSFAPGDAALVNVYDNGVLIGSAAVDASGNWSFVPTLPLTAGEHS FVAEAVDAAGNVSDKTAAWDFTLAGDAPAAPAIIQVLDDVGTVTGALQKGDTTDDNALTI TGTGAAETLVTVFVNGAVVGSVVVDASGNWSLTTADLGADGVKNITAQASDAAGQLSPMT GEYSVTLDTQAPTQPVRVVATDDQGAQVGPIAQNGVTDDAIPTFSGSGAESGALVKLYDN GVVIGSTTVDASGNWSYTASTALAGGAHAITATLTDKAGNTSVASEALNFSVETGEVVIS IVKAIDNVGSIQGDVASRGLTDDATPTLVGTATAGALVTVSEAGKVLGSVTADASGNWSL ELSTQTEGLHTYTAVARNGAGTEGSADFMLDIDLTAPSVPGVSGAFDDVGVYQGQLAQNG FTDDTTPTLTGSGNAGDTIKVYDNGTLLGSVTVSAEGAWSFTPSTPLAQGAHSLTATQSD AAGNESVASAAVSFTVDTTAPTATVQITAIDQDTDVPGDFITSDTSLSLFGTLSTALGAN EKVQISINDGSTWFDVVVSDLNWRYDDARVLTDGLHNYQVRVIDAAGNVGSQASQAVVID TGIGIGLNITDITPDSGVLGDFITSATSIAVKGTLSQELPSGARIQVSSDGGLTWANAAT TGTSWIFEDPTVHGDSVVVYQARVVAAGGAVVDSTSQEVTFDTSAPAASALIESITEDRG ASPSDFITNDNRLVINGSLSDAAEATDRVEVSLNGGNTWEMAAFEDGKWSLDMTDRELAD GTYIVQARVVDAAGNRGTISSQVLVIDTVGLGANGMTSSFTVATDTAVGISNGHSTAETA TNSDLITRDTTVTVSGTLNTALQTAQHLQISFDNGQSWVTVLSSSGSLWTYTLPEFAQSQ TLNVKMQLVDTAGNVATGTSFNDYTVVVDLDAPEPVTVAPVVAAAVTTGAALSFASDVHG RVESGALIALVEDSNKDGVYSEGVDKILGYATADAQGDWRIDAALSKGNHSIGFVVWDAA GNRSNLSDLVQVTASDATTAGSRVLQTTWGGTASGAQNGLNAAAVTVNEDGTWSFFQSSM SQSGGAMANAGYVYSGDDNQTYTSTYLAEPTGVSEHWEGGVISQAVFADYNRDGLQDVMS QTSSSTRNTALWTKNSDGTYTGTSLALGWGGIAGIGANGTETHVGGVVAYDAQGDGYLDF AFAGSNDSAYVKVTNDKGTLNYTMENGGTNFAHEISAVDVNNNGTVELAGHSGYDWTKGL SVQLSNADGSIASTYNQGGVFRRDSTVDNSNLPISMTWADFNGDGYLDLFISRSLGDDRA TDTDESRIYLNLGNDANGNWLGMSQNEQSLKFGDSMDGGASFAVDWNHDGQIDVIEVPRR NASNSSAQTGSPTVYLNQGDNVWSGTGQSLSGITTYDNITGATAVDYDWDGAVDLIMYRA GSTSAGLHADTATSILVRNENVVADGTSLHVRILDKNGLNVFYGNTVKLYNSAGDLVATQ IINPQSSASSNSQGLVNFYGLDASETYSVQLLRTENSTINHVGASTYQQNYVNGTVNLNW GGLTTGAAHDAYVLTAESTAAVNDTIGESGMVGTGYNDTFFGSEGNDTITGGGGWNTAMD GTQTWSATQGMDVVDYSRASLAMQINLKSGVAIGMGTDTLISIEGIVGSAFSDSITDSSA NNRIEGGAGNDVIYLTNGGNDTLLYKVLDASNATGGNGSDQIYSFHVGNVLTDGNADVID VSELLGYKGTAGLYQDQGVTKLDSASSELLDYLKVQVVGNDTVISVDRDGTGAEFGFSSI ATLVDVKTDLLTLLQNHQLVV NT seq 8706 nt NT seq  +upstreamnt  +downstreamnt atgttaccgatcaagatcatcgcaaaagacactgggcatcctctggatgtcacgggcaat aatctgctgacaatcaatcggccggcggtcatcaagatgtccacggcagccgaggatatt cagtcggtcagtcgtgaaggcgaacgtcttgttatcaagctcaagagcggggaaaccctc tccatcgatggttttttcgaggtggtcgatggcgtaaaaagtgatctggtgttcgaagat cccaagaccggcgagctgctgatcgccgattactcggtcccttggactggcgtgtcactg atgccgcttgagtcgatcgattcgctgctggccgtggctgaagtcgagtccacgggttgg ctggcgcccttgctgggcctggccgccgtgggcggcgcagtggcgattgccagccatcac ggcggtggcggtggtggcggtagcagttccgatgcggcgaatgccgatcaggggctgacc acaccgtcgacgccgagcgtactgttcaacaacatgcatggcctgaccggcaaggctgat gccggggcgaccatttccctgaccctggccgacggttccgtcgtcacgacggtggccgat gataccgggctctggcatttcaaccccaatccgctggccgatggcgagcagggcacgctg caagcaagcctgaatggcgtgcaaagcgccgctatcggctctggcgtggccgatgtcacc gcgcccgccgagccggtagtgacccagaacaaccaggatggcctggccggtactgccgag ccgggcagtaccattaccgtcagtcttgccgatggcagtaccgtcattgcgaccgtgggg gcagacggtcagtggaatgtcaccccgaacccgctgaccccgggcgttagcggatcgatc gtcgtcaccgatgccgccggtaactccagtgcgagcgtcgacaccggaatcatcaattcc acgcaaccgatacctcccactgttgaccagaacaacgccgatggcctgagcggcaccggc gagccaggcagcaccgtgaccgtcgaactgccagacggcagtaccgtgacaactatcgtc gacgaagacggtaattggtcgttcgtgccgaacccgttgcaaccgggtgaagaaggctcg gtcaccatcaccgatccagatggcaacaccagcactggcgtcgacacgggttccagcgat cagactccacctgcagccccgaccgttgaccagaacaatggcgatggcctgaacggcacc ggcgagccgggcagcaccgtggtcgttgaactgccggatggcagcaccgtgaccaccgtt atcgatgaaaacggcaactggtcgtttgtgccgaacccgctgcaaccgggtgaagaaggc tcgatcaccgtcatcgatccggcgggtaacaccagcgaaggggtgaacacgggtaccaat gaccagccgccatcaccagctcccgctgaccagaatcctcctgctgctcccactattgac cagaacaatggcgatggtctgagcggcaccggcgagccgggcagcaccgtggtcgttgaa ctgccggatggcagcaccgtcactaccgttatcgatgaaaacggcaactggtcgttcgtg ccgaacccactgcagccaggtgaagagggctcgatcactgtcatcgattcatcgggcaac gccagcgaaggggtaaacaccggttccagcgaccagactccgccggcggctccgactatt gaccagaacaatgaagcaggcctgaacggtaccggcgagccgggcagcaccgtggttgtt gagctgccggatggcagcaccgtgaccaccgttatcgatgaagacggcaactggtcgttc gtgccgaatccaataccagagggcgagcagggctcgatcaccgtcatcgatccggcgggt aacgccagcgaagcggtgaacaccggctccagcgaccagactccgccggcggctccgacc gttgaccagaacaatgaatcggggattagcggcactggcgagccgggcagcaccgtagtg gttgagctgccggacggcagcactgtgaccaccgttatcgatgaagacggcaactggtcg ttcgtgccgaatccaataccagagggcgagcagggctcgatcaccgtcatcgatccggcg ggtaacgccagcgaagcggtgaacaccggctccagcgaccagactccgccggcggctccg accgttgaccagaacaatgaatcggggattagcggcactggcgagccgggcagcaccgta gtggttgagctgccggacggcagcactgtgaccaccgttatcgatgaagacggcaactgg tcgttcgtgccgaatccaataccagagggcgagcagggctcgatcaccgtcatcgatccg gcgggcaacgccagcgaagcggtgaacaccggctccagcgaccagactccgccggcggcg ccgactgttgatcagaacaatgcttcgggtattagcggcactggcgaaccaggcagcacc gtagtggttgagctgccggacggcagcaccgtgaccaccgttatcgatgaagacggcaac tggtcgttcgtgccgaatccaataccagagggcgagcagggctcgatcaccgtcatcgat ccggcgggcaacgccagcgaagcagtaaacaccggtaccagcgaccagaccccaccggcg gcgccgactatcgaccagaacaatgccaatggcatcagcggcaccggtgagccgggtagc accgtggtcgtcgaactgccggacggcagcactgtgaccaccgttatcgatgaagacggc aactggtcgttcgtgccgaatccagtaccagagggcgagcagggctcgatcaccgtcatc gatccggcgggtaacgccagcgaagcggtgaacaccggttccagcgaccagactccacct gtggcgcctaccgttgatcagaacaatggcacgggcctgagtggtactggcgaagccggc ggcattgtgaccgttgaactggccgatggcagcaccgtcaccaccgttatcaatgaagac ggccactggtcgttcgaaccgaacccgctgcaaccgggtgaagcaggttcgatcaccgtt actgacatagctggcaatatcagtgaggccactcagaccgctccaagcgatcagaccgca ccggtcatcgaggaaagctcgctggatctggtggataacgtcggcacaattaccggcacc attgcccgtggcgatgtcaccgatgatgcgcaaccagagttcacgggctcgttcgctcct ggcgacgcggcgttggtcaatgtctatgacaacggcgtgttgattggcagtgcagccgtg gatgcctccggcaactggagtttcgtaccaacactgccgttgaccgcgggtgagcacagt ttcgtggctgaggctgtggatgctgcgggtaatgtcagtgacaagacggcggcctgggac ttcaccctggcaggagacgctccggcggcaccggccatcattcaagtgctggatgatgtc ggtacggtcaccggcgccttgcagaaaggtgacaccaccgacgataacgccttgaccatc accggtaccggcgcggcagaaacgctggtcactgtgttcgtcaacggtgctgttgtcggc tctgtggtggtcgacgccagtggcaattggagcctgaccactgcggatctgggtgcggac ggtgtgaaaaacatcacggcgcaggcctccgatgcagccgggcaattgagcccgatgacc ggcgagtattcggtcaccctggacacccaggcaccgactcagccggttcgggtcgtcgcg accgacgatcaaggcgcacaagtaggcccgattgcccagaacggcgtcaccgacgatgcc atcccgaccttcagtggcagcggtgcggagagcggggcgctggtcaagctctacgacaac ggtgtcgtcatcggttcgaccacggtcgatgccagcggcaactggagttacaccgcatcc accgcgttggccggcggcgcccatgccatcactgcgaccctcacggacaaggcgggtaat accagcgttgccagcgaggctctcaacttcagcgtcgaaaccggtgaagtggtgatcagc atcgtcaaggccatcgacaacgtcggcagtatccagggtgatgtcgccagccgtggtctg accgacgacgccacaccgacgctggtcggtactgcgaccgccggtgctctggtcaccgtc agcgaggctggcaaggtcctgggcagcgtgacggccgatgcttccggcaactggagcctg gaactgtcgacgcagaccgaaggcctgcacacctataccgccgtagcgcgcaatggcgcc ggtaccgaaggctcggccgatttcatgctggacatcgacctgaccgcgccatccgtaccc ggggtatccggtgcgttcgatgacgtgggcgtgtaccaggggcaactggcgcagaacggt ttcaccgatgacaccaccccgaccctgacgggcagcggcaatgccggcgacacgatcaag gtctacgacaacggcaccttgctgggcagcgtgacggtgtccgccgagggcgcctggagc ttcaccccatcgacgccactggcccagggcgctcatagcctgaccgccacccagtccgat gcggccggtaatgaaagcgtggccagcgctgcggtttcgttcactgtcgatacgacggcg ccaaccgccacggtgcagatcaccgccatcgaccaggacaccgacgtaccgggtgatttc atcacctccgatacttccctgagcctgttcggcacgctgtccacggcgctgggcgctaac gagaaggtgcagatcagcatcaacgacggtagcacctggttcgatgtggtcgtgagcgac ctcaactggcgttatgacgatgcccgggtgctgaccgatggcctgcacaactatcaggtg cgcgtcattgacgcggctggcaacgtcggctcgcaagcctcgcaagcggtggtcatcgat accggtatcggcattggcctgaacatcaccgatatcactccggattcgggtgtgttgggt gacttcatcaccagcgccaccagcattgccgtcaagggcacgctgagccaggagctgcca agcggtgcacggatacaagtgtccagcgatggtggcctgacctgggccaatgccgccacc accggtactagctggattttcgaagatccgaccgtacacggcgattccgttgtggtttat caggcgcgtgtggtcgcggccggcggcgcagtggtagatagcaccagccaggaagtcacc ttcgacacctcggcgcctgcggcttcggctctgatcgaatcgatcaccgaagaccgcggc gccagtccgagcgacttcatcaccaacgacaatcgcctggtgatcaacggctctctgagc gatgccgccgaggctaccgatcgcgttgaagtcagcctcaacggtggcaacacctgggaa atggccgctttcgaagacggaaagtggagcctggacatgaccgaccgcgagctggccgat ggcacttacatcgtccaggcgcgtgtggtggatgcggcgggtaaccgtggcaccatcagc agccaggttctggtcatcgatactgtcggcctgggcgccaacggcatgacgtcgagcttc accgtcgccaccgacaccgcggtcggtatcagcaacggtcatagcactgccgaaactgcc accaacagcgacctgattacccgtgataccacggtcactgtatctggcaccctgaacacc gcactgcaaacggcgcagcacttgcaaatctcgttcgacaacggccagagctgggtcacc gtgttgtcgtccagtggttcgctgtggacctacacgctgcctgagttcgcccaaagccag acactgaacgtgaagatgcagttggtggacaccgccggtaacgtcgccacgggcaccagt ttcaacgactacaccgtggtcgtggacctggatgcgccggagcccgtcactgtcgctccg gtcgtggctgcggccgttaccaccggtgctgcgttgtcgttcgccagcgatgtccatggt cgcgtcgagtccggtgcgctcattgcgctggtcgaagacagcaacaaggacggtgtctac agcgaaggtgtcgacaagatcctgggttacgcaacggcggatgcccagggcgactggcgc attgatgccgcgttgagcaagggcaaccactcgatcggcttcgtggtctgggatgctgcc ggtaaccgctccaatctcagcgatctggtgcaagtgactgccagcgatgcgacaaccgcc ggcagccgtgtgctccagacaacctggggtggcaccgccagtggcgcgcagaatggcttg aacgccgctgcggtgaccgtcaacgaagacggtacctggtcgttcttccagagttcgatg tcgcagagcggcggtgcaatggccaacgcaggttacgtctatagtggtgacgacaaccaa acttacacttctacgtatctggcagagcccactggggtctcggagcactgggaggggggt gtcatcagccaggcagtctttgcggactacaaccgtgatggcttgcaggacgtcatgagc cagaccagcagcagtacccgcaacactgccctgtggaccaaaaatagtgacggtacctat acgggcacatcgctggccctgggttggggtggcattgcggggattggtgccaatggtact gaaacccatgtcggcggcgtggtggcctacgacgctcaaggcgacggttacctggacttc gcatttgccggctccaacgacagtgcatacgtcaaggtcaccaacgacaaggggacgctg aactacacgatggaaaacggcggcaccaatttcgctcacgaaatcagcgcggtcgacgtc aacaacaacggtaccgtggagctggccggtcactcgggctacgactggaccaaaggcctg tcggtccagctgagcaacgcagacggcagcatcgcctccacctataaccagggtggcgtg ttccgtcgtgacagcaccgtcgacaacagtaacctgccaatctccatgacctgggcggac ttcaacggcgacggctacctggacctgttcatcagccgcagcctgggtgacgaccgtgca accgatactgacgaaagccgcatctacctcaaccttggcaacgatgccaacggtaactgg ctggggatgagtcagaacgagcagtcgctgaagtttggcgacagcatggatggcggtgcg tcgttcgccgtggactggaaccacgatgggcagatcgacgttatcgaggtgccacgtcgc aatgcgtccaacagctccgcgcagacaggctcgcctacggtgtacctgaaccagggcgac aacgtctggagcggtaccgggcagtccctcagtggtatcacgacctacgacaacatcacc ggtgcgacagcagtggactatgactgggacggcgcggtcgacctgatcatgtaccgtgcc ggcagcaccagtgccggcctgcatgcggataccgccacctcgatcctggtcaggaacgaa aacgtggtggccgacggcaccagcctgcatgtccgtatcctggacaagaacggtctgaac gtgttctacggcaacactgtcaagctgtacaactcggcaggggacctggtcgcaacccag atcatcaacccacagtcctcggcatcgagcaacagccagggcctggtgaacttctacggc ctggacgccagtgagacgtactcggtgcagttgttgcgcaccgagaacagcaccatcaac catgtgggtgcctcgacctatcagcagaactatgtcaatggcacggtgaacctgaactgg ggcgggctgacgaccggtgcggcgcacgatgcctatgtgctgacggcggagtcgaccgct gcggtcaacgacaccatcggtgagtcggggatggtcgggaccggttacaacgacactttc ttcggttccgaaggcaacgacaccatcactggtggtggcggctggaacaccgccatggac ggtacccagacctggagcgcgacgcagggcatggacgtggtcgactacagtcgtgcctcc ctggccatgcagatcaacctgaagtcgggtgtggcgatcggcatggggaccgacaccctg atcagcatcgaaggcatcgtcggtagtgcgttctccgacagcatcactgacagttcggct aacaaccggatcgaaggtggcgctggcaacgatgtgatctacctcaccaatggcggcaat gacacgctgctgtacaaggtgttggacgccagcaatgccaccggtggcaatggtagcgat cagatctacagcttccacgtaggcaatgtgctcaccgacggtaatgccgatgtcatcgat gtcagcgaactgctgggctacaaaggcacggcggggctgtatcaggaccagggcgtgacc aaactggacagcgcctccagcgagttgctggactacctgaaagtgcaggtcgtgggtaac gatacggtgatcagcgttgaccgtgacggtactggggccgagtttggcttcagctccatc gccacgctggtcgatgtcaagaccgacctgttgactctgctgcaaaaccaccagttggtg gtgtga

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