Pseudomonas chlororaphis PA23: EY04_13700
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Entry
EY04_13700 CDS
T03201
Name
(GenBank) transcriptional regulator
KO
K18900
LysR family transcriptional regulator, regulator for bpeEF and oprC
Organism
pch
Pseudomonas chlororaphis PA23
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pch03000
]
EY04_13700
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
pch01504
]
EY04_13700
Transcription factors [BR:
pch03000
]
Prokaryotic type
Helix-turn-helix
LysR family
EY04_13700
Antimicrobial resistance genes [BR:
pch01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
EY04_13700
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AIC19919
UniProt:
A0AAP9VZF6
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All DBs
Position
3038258..3039175
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AA seq
305 aa
AA seq
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MDRFNAMRVFTRIVDLGGFAKAADSLQMPRASVTVLIKQLEAHLGVQLLLRTTRQVTPTL
DGAAYYQRCVRLLADLEETEAVFSVARHNPRGTLRIDMPAGIGRLVVIPALPAFSERYPL
IDLEIGLNDRPVDLIREGVDCVLRGGLCLDDSLVARPLLALEQVTCASAAYLRQRGVPQS
LDDLAGHQMIEYFSSVSGKRYGLEFEVQGQVLLPELPKQVSVNSADGYLAACEAGYGLVQ
TPYYHVAQQLAEGRLIEVLRHIPPPRMPLSALYPPHRHLSTRVRVFVDWLVELFAQPGIH
NTRLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggaccgttttaacgccatgcgtgtgttcacccgtatcgtcgacctcggcggtttcgcc
aaggccgccgacagcctgcagatgccccgggcttcggtgacggtgttgatcaagcagcta
gaggcgcatctgggcgtgcaactgctgttgcgcaccacccgccaggtcacgccgaccctg
gacggtgctgcctactaccagcgctgcgtgcggctgctggccgacctcgaggaaaccgaa
gcggtgttttccgtggcgcggcacaacccgcgcggcaccttgcgcatcgacatgccggcg
gggatcgggcggctggtggtgatcccggcgctgccggcgttctccgagcgttatccgtta
atcgacctggaaatcggcctcaacgaccggccagtggacctgatccgcgaaggggtggac
tgtgtgttgcgcggtggcctgtgcctcgacgattcactggtggcccggccgttgctggcg
ctggagcaggtaacgtgcgccagtgccgcctacctgcgccagcgcggtgtgccgcagagc
ctggacgacctggccgggcatcagatgatcgaatacttctccagcgtcagcggcaagcgt
tatggcctggagttcgaggtgcagggccaggtgctgttgccggagctgcccaagcaggtg
tcggtcaacagcgccgatggttacctggccgcctgcgaggcgggctacgggctggtgcag
acaccttattaccatgtcgcccagcagttggccgaaggtcggctgatcgaggtgctccgg
cacatcccgccacccaggatgccgttgagcgcgctgtacccgccgcaccggcacctgtcg
acgcgggtcagggtgttcgtcgactggctggtggaactgttcgcccagccggggattcac
aacacccggctggcgtag
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