KEGG   Pseudomonas chlororaphis PA23: EY04_18260
Entry
EY04_18260        CDS       T03201                                 
Name
(GenBank) Hcp1 family type VI secretion system effector
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
pch  Pseudomonas chlororaphis PA23
Pathway
pch02025  Biofilm formation - Pseudomonas aeruginosa
pch03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pch00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    EY04_18260
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    EY04_18260
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pch02044]
    EY04_18260
Secretion system [BR:pch02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   EY04_18260
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: AIC20777
UniProt: A0A0E1EBH1
LinkDB
Position
4024128..4024616
AA seq 162 aa
MAVDMFIKIGDVKGESQDKNHKEEIDVLSWSWAMAQSGNMHVGGGGGAGKVNIHDLTLTK
WVDKSSPNLMMACSSGKHYDEAKLTVRKAGGDDPVEYLTITLKEVLVSSIGTGGSGGADR
LTENIALNFGQVLVDYQPQKQDGSKDGGPVKYGWNIRQNVKV
NT seq 489 nt   +upstreamnt  +downstreamnt
atggctgttgatatgtttatcaagatcggcgacgtcaagggcgagtcccaggacaagaac
cacaaggaggagatcgacgtgctttcctggagctgggccatggcccagtccggcaacatg
catgtgggcggtggcggcggtgccggcaaggtcaatatccacgacctgacgttgaccaag
tgggtggataaatcctcccccaacctgatgatggcctgctccagcggcaagcattacgac
gaggccaagctgacggtgcgcaaggccggcggcgacgatccggtcgagtacctgaccatc
accctcaaggaggtcctggtgtcctcgatcggcaccggcggcagtggcggcgcggatcgc
ctgaccgaaaacatcgcgctgaatttcggccaggtgctggtcgactaccaaccgcagaag
caggacggttccaaggacggcggcccggtcaagtacggctggaatatccgccaaaacgtc
aaggtgtga

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