Pseudomonas chlororaphis PA23: EY04_18290
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Entry
EY04_18290 CDS
T03201
Name
(GenBank) type VI secretion protein
KO
K11895
type VI secretion system protein ImpH
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
EY04_18290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pch02044
]
EY04_18290
Secretion system [BR:
pch02044
]
Type VI secretion system
Imp/Vas secretion system core components
EY04_18290
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T6SS_TssG
Motif
Other DBs
NCBI-ProteinID:
AIC20782
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Position
4028049..4029101
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AA seq
350 aa
AA seq
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MAGAPRMSTEPLKPLHSIDRMADEPWAYDFFQALRRIECEASDRPRIGHSLRLHDDPLRL
GQRPDCGFAPSTLASIETDAEGAAPRIEQFFFGLTGPNGPLPLHLTEYARDRQRNSGDAS
FTRFLDVFNHRLLCLFYRAWAEARPTVSHDRPDHDYWSMRLAALSGRGMTSLLGQGPIAD
SARYHFTGHLAALTRYPDGLRAILEDYFGVPVSIEEYVGQWLELPQRSQLGVALCSLGSD
LSLGTHIWDRQHKFRIRLGPLSLAQYQRLLPGQDSFGELAAWVAEYQGEELDWEVNLLLQ
RAQVPRIDLDGQTRLGFDTWLGSPPTDADDLLLVREYASHTTPSRSRDHE
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcgcaccccggatgtcgaccgaacctctgaaaccgctgcacagcatcgatcgg
atggccgacgagccctgggcctacgacttcttccaggcgctgcggcgcatcgagtgcgag
gccagcgaccggccgcgcatcggccattccctgcgcttgcacgacgacccgctgcgcctg
gggcagagacccgactgcggctttgccccctcgaccctggccagtatcgagaccgacgcc
gagggcgccgcgccgcgcatcgagcagttctttttcggcctgaccgggcccaacggcccg
ctgccgctgcacctgaccgaatacgcccgcgatcgccagcgcaacagcggcgacgccagc
ttcacgcgctttctcgacgtgttcaatcaccgcttgttgtgcctgttctaccgcgcctgg
gccgaggcgcggccgaccgtcagccacgaccgccccgaccacgactattggtcgatgcgc
ctggccgcactgtccggacggggcatgaccagcctgctcggccagggcccgatcgccgac
tcggcgcgctaccacttcaccggccacctggcggcactgacccgctacccggacggcttg
cgtgcgatcctggaagactatttcggcgtgccggtgagcatcgaggaatacgtcggccag
tggctggagttgccgcagcgcagccagctgggcgtggcgctgtgctcgctcggcagcgac
ctgagcctgggcacccacatctgggatcgccagcataaattccgcatccgcctggggcct
ttgagccttgcgcaataccaacgcctgctgcccggccaggacagcttcggcgaactggcc
gcctgggtcgccgagtaccagggcgaggagctggattgggaagtcaatctgctgctacag
cgcgcgcaagtgccgcgcatcgatctcgacggccagacccgcctgggcttcgacacctgg
ctcggcagcccgccgacggatgccgacgacctgctgctggtccgcgaatacgccagccat
accaccccctcaaggagccgcgatcatgagtga
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