Pseudomonas chlororaphis PA23: EY04_18505
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Entry
EY04_18505 CDS
T03201
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EY04_18505 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pch03400
]
EY04_18505 (uvrC)
DNA repair and recombination proteins [BR:
pch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EY04_18505 (uvrC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_5
UVR
GIY-YIG
HHH
HHH_2
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AIC20824
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Position
complement(4083466..4085289)
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AA seq
607 aa
AA seq
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MNDPFDPSAFLSTCSGRPGVYRMFDGDACLLYVGKAKNLKSRLASYFRKTGLAPKTAALV
GRIAQIETTITANETEALLLEQTLIKEWRPPYNILLRDDKSYPYVFLSDGEFPRFSIHRG
AKKQKGKYFGPYPSAGAIRESLSLLQKTFMVRQCEDSYYKNRTRPCLQYQIKRCKAPCVG
LVEAEVYAEDVRHSVMFLEGRSNALTDELSAGMEQAASTLDFEKAAELRDQISLLRRVQD
QQSMEGGSGDVDVVAAFVNPGGACVHLISVRGGRVLGSKNFFPQVGIEEDVAEVMSAFLG
QYFLSSPERDLPSELIVNVVHEDFPTLITAIQALRGRELSISHRVRGTRARWQQLAVTNA
EQALGARLANRQHVAARFEALADMLNLDEPPQRLECYDISHSSGEATVASCVVFGPEGPL
KSDYRRYNIEGVTAGDDYAAMHQALTRRFSKLKDGEGKLPDILLVDGGKGQLSMARDVLN
ELAVPDLILLGVAKGATRKAGFETLYLNDAAHEFTLKGDSPALHLIQQIRDEAHRFAITG
HRARRGKTRRTSTLEGVAGVGPKRRRDLLKHFGGLQELSRASIDEIAKAPGISKKLAELI
YANLHSE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacccgtttgatcccagtgcttttctttccacctgcagtggccgtcctggcgtg
tatcgcatgttcgatggcgatgcatgtctgctctacgtcggtaaagccaagaacctgaag
agccgcctggccagctactttcgcaagactggcctggcgccgaagaccgccgccctggtg
gggcgtatcgcgcagatcgaaaccaccatcaccgccaacgaaaccgaagccctgctgctc
gagcagacgctgatcaaggaatggcggccgccgtacaacatcctgttgcgcgacgataag
tcctatccctatgtgtttctctcggacggtgagtttccgcgtttcagcatccatcgcggg
gcgaaaaagcagaagggcaagtacttcggcccgtaccccagcgccggggccattcgcgag
agcctgagcctgctgcaaaagaccttcatggtccgccagtgtgaggacagctactacaag
aaccgcacccggccgtgcctgcagtatcagatcaagcgctgcaaggcgccctgtgtcggc
ctggtggaggccgaggtgtatgctgaggatgtgcgccactcggtgatgttcctcgaaggg
cgcagcaatgccctgaccgatgaactgtcggccggcatggagcaggcggccagtaccctg
gacttcgagaaagccgccgagctgcgcgaccagatttccctgctgcggcgggtgcaggac
cagcagagcatggaaggtggcagcggcgatgtggacgtggtggcggccttcgtcaacccg
ggcggcgcctgcgtgcacctgatcagcgtgcgtggcggccgggtgctgggcagcaagaac
ttctttccccaggtgggtatcgaggaggacgtggccgaggtcatgtcggcgttcctcggc
cagtactttctcagcagcccggagcgcgacctgcccagcgagctgatcgtcaacgtggtc
cacgaagacttcccgaccctgatcaccgcgatccaggccttgcgcggccgcgagctgagc
atcagccaccgggtacgtggcacgcgggcgcgttggcagcagctggcggtaaccaacgcc
gagcaggccctgggcgcgcgcctggccaaccgccagcatgtggcggcacgtttcgaagcc
ctggccgacatgctgaacctggacgaaccgccgcaacgcctggagtgctacgacatcagc
cactccagcggcgaggcgaccgtggcgtcctgcgtggtgttcggcccggaaggtccgctg
aagtccgattaccggcgctacaacatcgaaggcgtcaccgccggcgacgactatgcggcg
atgcaccaggccctgacccggcgcttcagcaagctcaaggacggcgagggcaagctgccg
gacatcctgctggtggacggtggcaagggccagctgtccatggcccgcgacgtgctcaac
gagctggcggtgcccgacctgatcctgctgggggtggccaagggcgcgacgcgcaaggcc
ggtttcgagaccctctacctcaacgatgccgcccatgagttcaccctcaagggcgattca
ccggcgctgcacctgatccagcagatccgcgacgaagcccaccgtttcgcaatcaccggc
caccgtgcgcgccgcggcaagacccgccgcacctcgaccctcgaaggcgtggccggcgtc
ggtcccaagcgccgtcgcgacctgctgaagcattttggcggattgcaggagctgtctcgc
gcaagcatcgacgagatcgccaaggcaccggggatcagtaaaaagctcgctgagttgatt
tatgcgaacttgcatagcgagtag
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