Pseudomonas chlororaphis PA23: EY04_19925
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Entry
EY04_19925 CDS
T03201
Name
(GenBank) transcriptional regulator HU subunit alpha
KO
K03530
DNA-binding protein HU-beta
Organism
pch
Pseudomonas chlororaphis PA23
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pch03032
]
EY04_19925
03036 Chromosome and associated proteins [BR:
pch03036
]
EY04_19925
03400 DNA repair and recombination proteins [BR:
pch03400
]
EY04_19925
DNA replication proteins [BR:
pch03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EY04_19925
Chromosome and associated proteins [BR:
pch03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
EY04_19925
DNA repair and recombination proteins [BR:
pch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
EY04_19925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Barstar
Motif
Other DBs
NCBI-ProteinID:
AIC21092
UniProt:
A0A0D5XYE2
LinkDB
All DBs
Position
complement(4408432..4408704)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIDAIAASADIPKAAAGRALDAVIESVTGALKAGDSVVLVGFGTFSVTDRPARIG
RNPQTGKTLEIAAAKKPGFKAGKALKEAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtcggaactgattgatgctatcgctgcatctgctgatatcccgaaagctgct
gctggccgtgcgctggatgcagtaatcgaatccgtcactggcgctcttaaggctggcgac
tccgttgtactggttggtttcggtactttctctgttaccgatcgtcctgctcgcattggt
cgtaacccacagaccggtaagacgctggaaatcgctgcagccaaaaaaccaggtttcaaa
gctggtaaagcactgaaagaagccgttaactaa
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