Pseudomonas chlororaphis PA23: EY04_21020
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Entry
EY04_21020 CDS
T03201
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch00550
Peptidoglycan biosynthesis
pch01100
Metabolic pathways
pch01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EY04_21020
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EY04_21020
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pch01011
]
EY04_21020
Enzymes [BR:
pch01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
EY04_21020
Peptidoglycan biosynthesis and degradation proteins [BR:
pch01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
EY04_21020
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
AIC21300
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All DBs
Position
complement(4673877..4675769)
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AA seq
630 aa
AA seq
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MPEPIPIKDHEKETQLVNKRLLACALLVVAITCTLIGRLYFLQVVEFDYHSTISENNRVH
VLPITPTRGLIYDRNGVLLADNRPSFNLTITRERTTDLKGELDQVVSLLHLPAEDRVLFD
KALKQSRHPFVPVTLFYALTEEQIAVLAVNEYRLPGLEVEAQFVRHYPMGAHFAHSIGYV
GRINEKEAKVLDSVEYRGTQSIGKTGIERFYESELHGHVGYEEVETNAQGRVMRVLKHTD
PIPGKNIVLSLDVKLQEAAEAALGDRRGSVVALDPQTGEVLAMVSKPSFDPNLFVTGISF
KEYSALRDSIDRPLFNRVLRGLYAPGSTIKPEVAIAGLDSGVVNASTRVFDPGYYQLPDV
DHKYRNWNHSGDGWVDLDAAIMRSNDTYFYDLAHKLGIDRLHDYLAMFGLGEKVSLDMFE
EASGLMPSQAWKRATRRQPWFPGETVILGIGQGYMQVTPLQLAQATALIANKGVWNRPHL
AKTVDGVAPVDEHPMPNIQLKDPVDWDLVSHGMQMVMHAPRGTARDAAAGAQYRIAGKSG
TAQVVAIKQGERYNRLKTHERHRDNALFVGFAPAEHPQIVVAVMIENGEAGGRVAGPVVR
QVMDAWLLDQQGHLKPQYASPGKGPDVPHA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaccgataccgatcaaggaccacgaaaaagagacgcagctggtcaacaaaaga
ctgttggcctgtgccctgttggtggtcgccatcacctgcaccctgatcgggcgcctgtat
ttcctgcaggtggtcgagttcgactatcactcgaccatctccgaaaacaatcgtgtgcac
gtgctgcccatcaccccgacccgcggcctgatctacgaccgcaacggcgtgctgctggcc
gacaaccgtcccagtttcaacctgaccattacccgtgagcgcaccaccgacctcaaaggc
gagctggaccaggtggtcagcctgctgcacctgcccgccgaagaccgagtcctgttcgac
aaggcgctgaagcagtcacgccacccattcgtgccggtcaccctgttctatgcactgacc
gaagaacagatcgccgtactggcggtcaacgagtaccgcctgccggggctggaggtcgag
gcgcagttcgtgcggcactatccgatgggcgcgcacttcgcccattccatcggctatgtc
gggcgtatcaacgagaaggaagccaaggtcctggactcggtggaataccgcggtacccaa
tcgatcggcaagaccgggatcgagcggttctacgagtccgagctgcatggccatgtcggc
tatgaagaggtggaaaccaacgcccagggccgggtcatgcgggtgctcaagcacaccgat
ccgatccctggaaaaaacatcgtgctcagcctcgatgtgaagttgcaggaggcggccgag
gcggccctgggcgaccgtcgcggatcggtggtggccctcgatccgcagaccggcgaagtg
ctggccatggtcagcaagccgagcttcgacccgaacctgttcgtcaccggcatcagcttc
aaggagtacagcgcgttacgcgactccatcgaccggccgctgttcaaccgcgtgctgcgc
ggcctgtatgcgccggggtcgaccatcaagccggaagtggcgatcgccgggctggactcc
ggggtggtcaacgcctcgacccgggtgttcgatccgggttactaccaactgccggacgtc
gaccacaaataccgcaactggaaccacagcggcgacggctgggtggacctggacgcggcg
atcatgcgctccaacgacacctacttctacgacctggcgcacaagctcggtatcgaccgc
ctgcacgattacctggcgatgttcggcctgggcgagaaagtctccctggacatgttcgag
gaagcatcggggctgatgccgtcccaggcctggaagcgcgccacccggcgccagccgtgg
ttccccggcgagacggtgattctcggcatcggccaaggctacatgcaggtcactccattg
cagctggcccaggcgacggcgctgatcgccaacaagggtgtgtggaatcgccctcatctg
gccaagaccgtcgatggcgtggcgccggtggacgaacacccgatgccgaatatccagctc
aaggacccggtcgactgggacctggtcagccatggcatgcagatggtgatgcacgcgccc
cgcggcaccgcgcgcgacgcagcggccggcgcgcaataccgcatcgccggcaagagcggt
acggcgcaggtggtggcgatcaagcagggcgagcgttacaaccggctcaagacccacgag
cgtcatcgcgacaatgccctgttcgtcggtttcgccccggccgagcacccgcagatcgtg
gtggcggtgatgatcgagaacggcgaggccggtggccgggtcgcggggccggtggtgcgt
caggtcatggatgcctggctgctcgaccagcaaggccacctgaagccgcaatacgccagc
cccggcaaggggccggacgttccccacgcctga
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